CI01000300_00150486_00160308


Basic Information

Item Value
gene id CI01000300_00150486_00160308
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 150486 ~ 160515 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_00150486_00160308.mRNA
AGACAACTCGGCTTGTCCTCGGAGGAAGCTCTGTCTCAGCTTCATACTCAGCTGTCATCTGTCCTACAACAACACAGAGAGAGCTGTATAAAAGACGGGCAATGGAAGGCAAAGGCACAGAGGACCTGTTCGCCCCACCCTCCCCTGCCGTGTCACGACAGTGGGCCTATCGTGACGGGAAACTGGTCAATCTACCTGTCAGTCTGCTGGTGGAGGGTGACATCATCTCTTTACGCCCTGGCAGTGAAGCACCAACTGAACTAAGAGGAATTCAGGAAGAGGAGCATGTTGTCTTATCCCGCAGTGATGTGTTTAGTCACCTCTCCTCTCCCCCATCCCCATTGGATAGTGAAAGGCCCCGCCCACATCGTTTGCTCCAACCACAGCTCTTCAGGGTAATGAAGACTCCAGCAGCTGAAGTGGTTCAGAGGTGTTTGGAGCTCTCTCAGCACAGACCTGTGTCTGTTCTGGATAATGAGCGTTTCACTGTGCAACGTTTATTAGAGAGAGGCCTAGCGCCTTTTGTCCTGGTGAATGGTGTTTTACCTTTGTTGCCCCTGACTTTCCCCCTGCTTTGGGTTCTTGTGTGCATGTACGGAGAGGCCTGTGTTCTTTTACAGATGGGCTCGCAGCCAGCGGACTGGTGGGAACTGTGGAAGTTGACCTGCAAGAAATGTTACTCAGTGATCTGGGGTCAAACATTGACACTCTGCCACACCGCTAGTTTGCTGCACAGTCTGGGATCTGTAACTGTCCTGTGCTGTGTTGATAAGCAGGGTATTCTCTCATGGCCCAGTCCAAACCCTGAAAAGATTCTGTTCTTCAGCAAGTCCACCTCATCACAAGAGACAGAAAGACAGAGGCAAAAAGAGGCAAAGAAAGACAAAGATACAGAAGAGGTTGGCTTGAAGGACCCCATTCAGATCCGCTCACTCTGCAGTCTAGAGATGTTGAGTTTGTCGGTGGGTCAGGCTCAGTGTGATGACACATGGCTGCAGTTTGATGACACGTGCTGGCAACGCCACGCTCCCTCTCTTCGGCCTCTGGGATTGGCTGTGCAGTTAGTCCTCTGCAATCCTGGAGTTGCCACCCGCATGCTCCGCCTCTCTGACCACCTGACCCATGCTGCGCTGGTGCGCACTCGACCCCCTTGTCAGCCAGTCCGCCCACCCTGGGGGCTCTGCCATCTACCAAGGATTCTAGGCTTCTCCACCTCCGCAAAGGAGCCTTTCGAACAGAGAATGAGTGTGGCAGCCTACACCCTGCCCTCCATCTCCTGCCCTGGAGACCCAGGGATCATTGCTCCACCTTCTGTGTCAATGAGACAGCTTCCTTTCTCACATCTCATAGCACTGCTGGTGCACCACACTCAAACTGGTGAGCATACGCACATGTATACATGCATGAACATCCTTGGATGCATGTGACCTGTGACCTTACTACACGCACTGCCAATAGTAAGCGGTTACTATGCTCGGAACAGGATTCTAGCATATTGTTTACACCATATACAGAAATAGTATGTGAAAAAAAATGCATTATGTAAGGAAGGGGTTTATTTGTTTATTTATTTATTTTTTTGATAATAATCTGTAATTATACATTATTTCACTCTTTGTACAGCTGCTTACCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_00150486_00160308.mRNA True 1634 mRNA 0.50 9 150486 160515

Neighbor

gene id symbol gene type direction distance location
CI01000300_00103395_00123529 SLC5A10 coding upstream 26957 103395 ~ 123529 (+)
CI01000300_00003224_00007587 NA coding upstream 142452 3224 ~ 8034 (+)
CI01000300_00180177_00181561 NA coding downstream 19605 180120 ~ 181617 (+)
CI01000300_00226653_00303160 NA coding downstream 66138 226653 ~ 303160 (+)
CI01000300_00313257_00313598 NA coding downstream 152742 313257 ~ 313641 (+)
CI01000300_00324861_00371897 NA coding downstream 164051 324566 ~ 372421 (+)
CI01000300_00373895_00378177 ALKBH5 coding downstream 213380 373895 ~ 378403 (+)
G408104 NA non-coding upstream 3251 146998 ~ 147235 (+)
G408066 NA non-coding upstream 119220 29140 ~ 31266 (+)
G408059 NA non-coding upstream 132198 17958 ~ 18288 (+)
G408058 NA non-coding upstream 133561 16689 ~ 16925 (+)
G408056 NA non-coding upstream 135317 14895 ~ 15169 (+)
G408149 NA non-coding downstream 68884 229399 ~ 229789 (+)
G408162 NA non-coding downstream 118285 278800 ~ 279317 (+)
G408163 NA non-coding downstream 128139 288654 ~ 288963 (+)
G408166 NA non-coding downstream 134035 294550 ~ 294974 (+)
G408171 NA non-coding downstream 160094 320609 ~ 320843 (+)
G408510 NA other downstream 816085 976600 ~ 977099 (+)
G408498 NA other downstream 856552 1017067 ~ 1020734 (+)
G408910 NA other downstream 1472515 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 1589385 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 2152894 2312515 ~ 2321088 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000996 NA non-coding NC_007112.7 CM002885.2 8202390 ~ 8205228 (-)