CI01000300_01241607_01253459 (RGS11)


Basic Information

Item Value
gene id CI01000300_01241607_01253459
gene name RGS11
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1241607 ~ 1254009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_01241607_01253459.mRNA
GTGCAGACGTTGTCGAATGGCTGATTAAGAAATTTTCTATCTCTGATGAAGAGGCATTGCACATTGGACACCTTTTTGTGAAGTATGGATACATTTACCCTTTAAAAGAGCCCAGAAACCTTATTCTGAAAGCTGATGATTCACCATATCGCTTTCAGGAGTGCTATAATGCTTTACATAAACGCATCAACCACACCTGGGACTTTGTTGTGATGCAGGCAAGAGAGCAGCTCAGTTATGTGAAGTACTGTGAGCAGTACCAGCCCCATGACCCCATAATGCAAGGATGCCTTCCCAGCAACCCCTGGATCACAGATGATGTCATGTTTTGGAACATGAACTCTGAAACAGTTGCTGTGCCGACTAAACTGCGTGTGGAGCGCTGGAGCTTCAGCTTCATGGAGCTGCTGAATGACCCGATGGGCAGAAAAGAGCTCCTCATTTATTTGGAGAAAGAATTCAGCGCGGAGAACTTGTGTTTCTGGCAGGCCTGTGAGGACGTTCGTCATGGAGAGACCTCAAAAATTCCAGAGAAAGTCAACGAGGTTTACAAGCAGTTTCTGGCTCCTGGTGCAAGTCGCTGGGTGAATATCGACAGCAAGACCATGGAAAAAACCCTGGAAGGACTTAAGCGCCCTCATCGTTTTGTCTTGGATGATGCTCAAATGCACATTTACTTCCTTATGAAAAAGGATTCGTACCCTCGTTATCTTAAATCGGAACTGTACAAGAACTTATTAGCCAGAGCCATTGTACCACAAGAAACCAAGAAAAGCGTGTTCCCGTTCATGCGCCGCCAGCGTCACTCCAGCCCCTCACCTGCTCTCGCCACACAAACCCCAGAGGATGATGGAAAGAAATCTAACTCTATCAAAAGCAATTCCGGAACTACATCTCGGCTTTAAACATGCACACAACATTTACTGCTATGTAAAACACTTTTTTTTGTGCTACCTGCTATTACCTAACACAGCTGTAAATGGCATCTGAATCATCTCCGGTTGTACTCTACAAAACAGATGTTAGTTAAACAGTAGCAATAGCTAAAGGTTATTATTTAAAAAGAATGCTTGATTCACATTTCTCTATCATAGAACTACAACTTTTCATGCATTTCAAAGATACAATTTATGATGTAGCAATAATGTCGTCAGACATATTCTCACAAACTTTCAGCTTATGTTTTCTTCAGCGTTTTAAGTGGAACTTGCCTTTTTCACACATTTGTCATGTTTTTAATGTATTTATTTGATATAAAGATTTTCCTTTCAGCTATAAATGTACTTTTGTCATAGTTTTTTATATCATATACTATGAAAGTGCTTCAGTGAATACTTGAAGGGATATGATGGGACAGAGTAAATATAGTACATCTGTAGTAAATTTATAAATGTACAGTAAATCATTAGTAACATAATATAAAGGGCTATGTATTTGGTAAATAATCCAGAGGAA

Function

symbol description
rgs11 Predicted to act upstream of or within G protein-coupled receptor signaling pathway; intracellular signal transduction; and negative regulation of signal transduction. Orthologous to human RGS11 (regulator of G protein signaling 11).

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0005834 heterotrimeric G-protein complex cellular_component

KEGG:

id description
K16449 RGS; regulator of G-protein signaling

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_01241607_01253459.mRNA True 1455 mRNA 0.40 9 1241607 1254009

Neighbor

gene id symbol gene type direction distance location
CI01000300_01225430_01228695 PMM2 coding upstream 12620 1225430 ~ 1228987 (+)
CI01000300_01128973_01131417 ELFN1B coding upstream 110166 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 112847 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 372836 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 415172 806846 ~ 826435 (+)
CI01000300_01272675_01273342 NA coding downstream 18666 1272675 ~ 1273753 (+)
CI01000300_01275725_01282289 NA coding downstream 21356 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 47898 1301907 ~ 1306339 (+)
CI01000300_01331788_01335474 NA coding downstream 76350 1330359 ~ 1335569 (+)
CI01000300_01343814_01353541 TRIM2, TRIM2B coding downstream 89805 1343814 ~ 1355389 (+)
G408505 NA non-coding upstream 6393 1235002 ~ 1235214 (+)
G408504 NA non-coding upstream 8729 1232585 ~ 1232878 (+)
G408507 NA non-coding upstream 9122 1232284 ~ 1232485 (+)
G408503 NA non-coding upstream 91259 1149802 ~ 1150348 (+)
G408508 NA non-coding upstream 93620 1147620 ~ 1147987 (+)
G408588 NA non-coding downstream 767 1254776 ~ 1254976 (+)
G408607 NA non-coding downstream 37807 1291816 ~ 1292458 (+)
G408609 NA non-coding downstream 70853 1324862 ~ 1325451 (+)
G408614 NA non-coding downstream 81795 1335804 ~ 1336027 (+)
G408620 NA non-coding downstream 126553 1380562 ~ 1380835 (+)
G408498 NA other upstream 220873 1017067 ~ 1020734 (+)
G408510 NA other upstream 264508 976600 ~ 977099 (+)
G408910 NA other downstream 379021 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 495891 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1059400 2312515 ~ 2321088 (+)
G409984 NA other downstream 2017676 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2647179 3901148 ~ 3902892 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_000120 NA non-coding NC_007112.7 CM002885.2 9886955 ~ 9914630 (+)