CI01000300_01272675_01273342


Basic Information

Item Value
gene id CI01000300_01272675_01273342
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1272675 ~ 1273753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_01272675_01273342.mRNA
AAGAATATGAAGAGGAGCTGAGAGAGGACAGTCTGGAGGAGGAAGAGGATGGAGTAGCCAGTGAGTCTCAAGAGGAAGAGCCGTGGAGTTTTGACCCCTGCCCCAATAACGCTGAGATGACCAACCAGCTCCTGCGGTTCGCTGAACTCATCAGCAACGATGTCCAGCGCTACTTTGGTCGAAGCCAAGACCCTGATGCCTGTGACATTTATGCAGAGAGGCCATGTCCAAAAGTCGGGGGCCGCCAGCGATACTATGCTGACTTCATCAAAGTAGCATCATCAGGGCAGGCTGAGGAGCCTGAGTCGCTCGGGCCCCTTGCAGAGCTCTTTCAAGATGCTCAAAGGAAAGGGCGGGGTCTGCCCATGAGTCAACGGCGCCTGCCAATCAGCTTCTGGACAGAGCCTTTCGCACACCAGCTTGATGTGTTAAGTGATACCAGCACACAAGAGAACTCGCTCAGTATGATCGACACTTCAGAGAGCTCTATCAACATCAGCACGTCATTGAGCATGTTCAGTAACACGAGTGTGTGCACCATGACCAGCTCCAGTGTCTCAGGGACTCTCAGCAGCTCAAGCACCCCAGACTTCAGTGATTTACTCGCTCACTGGGCCATGGACAGAGAGAATCCCAGTGAATTTAACTCTGACTACCAACTATCATAACCAGTGTTTGCCAGTCATATCACTGCAAAATATAATTTAAATTTTAATGCTTAAATCTTTTCTTTCTGTTACCTAGACATTTTCTTTAGAAAATGCATTTGGAATATCAAGTGTATTTTGTCATGTTCCAGTCTCAGATGTTTTCATTTATTTTAAGTATAAAACTTTTTTTTTATGCTATTTTTTTGGTAGTGTAACTGTATTACATTTTTAATACAAAACTGTATTTCTGTATAATTCTTGCTCTGTTTGTTTTCATGTATAAAAAGAATTATTTTGATAAAAAATGTATGCAGCTAAATATGGAATTAAATTACCCTGTTTGTGATTAATAATTCTGCTATATCTTCACATATCTTCTTTTACTATAGGCAGAAATAAGGAATGATCTGGTCAGGTCACAATCACAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_01272675_01273342.mRNA True 1079 mRNA 0.42 1 1272675 1273753

Neighbor

gene id symbol gene type direction distance location
CI01000300_01241607_01253459 RGS11 coding upstream 18666 1241607 ~ 1254009 (+)
CI01000300_01225430_01228695 PMM2 coding upstream 43688 1225430 ~ 1228987 (+)
CI01000300_01128973_01131417 ELFN1B coding upstream 141234 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 143915 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 403904 862740 ~ 868771 (+)
CI01000300_01275725_01282289 NA coding downstream 1612 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 28154 1301907 ~ 1306339 (+)
CI01000300_01331788_01335474 NA coding downstream 56606 1330359 ~ 1335569 (+)
CI01000300_01343814_01353541 TRIM2, TRIM2B coding downstream 70061 1343814 ~ 1355389 (+)
CI01000300_01373306_01377544 FGB coding downstream 99467 1373220 ~ 1377648 (+)
G408588 NA non-coding upstream 17699 1254776 ~ 1254976 (+)
G408587 NA non-coding upstream 20206 1252104 ~ 1252469 (+)
G408586 NA non-coding upstream 22492 1249980 ~ 1250183 (+)
G408585 NA non-coding upstream 28326 1244119 ~ 1244349 (+)
G408505 NA non-coding upstream 37461 1235002 ~ 1235214 (+)
G408607 NA non-coding downstream 18063 1291816 ~ 1292458 (+)
G408609 NA non-coding downstream 51109 1324862 ~ 1325451 (+)
G408614 NA non-coding downstream 62051 1335804 ~ 1336027 (+)
G408620 NA non-coding downstream 106809 1380562 ~ 1380835 (+)
G408628 NA non-coding downstream 168871 1442624 ~ 1442884 (+)
G408498 NA other upstream 251941 1017067 ~ 1020734 (+)
G408510 NA other upstream 295576 976600 ~ 977099 (+)
G408910 NA other downstream 359277 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 476147 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1039656 2312515 ~ 2321088 (+)
G409984 NA other downstream 1997932 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2627435 3901148 ~ 3902892 (+)

Expression


Co-expression Network