CI01000300_01303949_01305865


Basic Information

Item Value
gene id CI01000300_01303949_01305865
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1301907 ~ 1306339 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_01303949_01305865.mRNA
GTATAAATGTCATTCACTCAAAGTAAGGCTGTCAGTGGAGGGACAGAAAGCTCCGAACATGAATGAATGAAAGTCTTACGGGTTTGGAACGACATGGGGATGAGTAAATGATGACAGAATTTTCTTTTTTGGGACAACTAAACCTTTAACTCACCCTAAGGCACGCTCACTATGTAGCTGAAGGCACATTCCTCTTTATTGCAACAGAACGCACAAATATATATAGCTGAACAGTGAACAAATAAACAGGTAGAGTGAGTTAGGCAGTGATGTTATAAGACGGAAGATTCTACAAAGTATCAACACGCAGGTAAGAATAATTCAGCTATATACACCTGTTTAAAGTGAATTCACTCTTGATGTATGATACACTGAGTTAGAAAAAAGCATTTTGAAATAAGGTATGGCAGATTAAAATGGCATTAGGTGAAATGTGTTATTATTTTCAGGTTAACTCGTATGAAACCCAATTCATGTATGTAGGAACATTTGCAAAAAAGACAGGCAAACATTCCCAAGTTCACTGTACGTTTATTTACAGTACGTGATAAAGTGCGTAAATAGAAATACATGCTTCAATACCAACGTGAGAAATAAGGTCCGAATGTCATGTGACTAGTTGTTTTTTCAAGCCATGTTCACAACTGAACAAAAATGGCAGTATCGGGCTTAGAAATCAAATAATACATGTAGAATGATATATCATGTGGATGAATAAAATAAATATTTTGTATTTGTAAAAAAAAAAAAAAGAAAAAAAAGAATAAGGGCGTTTACGTAAGGACATTACTTTCTTTTACGTGTTGTTGCAGTGCCAGTTTTTTCCTCTTGCTCTTTTCATTCCTATCATACTTGAACCAGAATGAAACCTGAAAGATTAAATGTAGACAAACACAAGTATAAAGTACATGTTTTATAATGTAGGGTGAATTGTTTTATGGTTAATACACGTTCTCAGTCTTTTTCTTTCATAATGCGTCATGTTAATATATTTACAAAGTGTACTGAATGTCTCAACATGCTTGGCTTTGTTCTACATTGGGCTGAACTTGCTTCGGTGTAGAAGCACTGATCTATAACAATTATAACAGGTTACCACTTTCCTCAGCTCTGTGAGCACTACTGGTTAGAAAGACAGTGTGTATTATTTTCCTACTGATAGATTATTTAGATTAGACTTATATATAATGACTGAATCAGAACATACCTGATGGTCTTCATTAGATGTTAGTATTTCTAAAAGAAGGAAGGTAATGTAGCCTACACCTATTTTATTTTTTATTTTCTTTAAAAGCTCAATGACTTTAAAGGGTTAGTTTACCCAAAAATAAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCACACCTGTAAGACTTTTAATTATCTTCGGAACACAAAAGAAGATCTTTTTGATGAAATCTGAGAGATTTCTGATCCTCCATAGACAGGTAGGCAATGGACACTGACGCTTCAAAAAGTTCATAAAGAGATCATAAAACTAATCCATGAATTGAGCGGTTTAGTCCGAATTTTCTGAAGAGACTTGATCGCTTTATATTATGAACAGATTTAATTTGGGCTTTTATTCACATATAAATATTGTTCAGCGAACATAAACAAGCTCATCCAAAACCTTCTTGATGCGCGAGAACAAACCTCTTGCAGAAGCTCAAACGTGCTTCGAAACACACGAGAATGAACCTCATTTCTCGCACGTCAAACAAACATGCTTGAGCTTCTGTTTACCACAACTGATGTGCGAGTTGATAAATGTTTATATGTGAATATAAGTCTAAATTCAATCTGTTCATCATATAAAGTGATCGAGTCTCTTCAGAAAATTTGGACTAAACCGCTCAATTCATATACATTAGTTTTATGATCTCTTTATGAACTTTTTGAAGCGTCAAAGTGTCAGTTGCATAGCTGGAGGACATGAGGGTGAGTAATTAATGATAATTTTTATATATATATTTTTTTTTTTTGGTGAACTATCCCTTTAAGTATATAGGCCTACTATCTCATTAGATTCAGTATGAGTATACCTGCATACCCACCCCCCAAATACGAAGACATCCATTTTAATGAGGATCCCGCTACACCGCCATCCTTAAATGCCGCGGCTACAGCGCCACCTCCCTACAGTGAGACAGATAATTTTCAAGAGATTCTTCAGATTCCTCAAAACCCTAATATGAGGAGGGCAAACCCTTATCCTGTCCTCAATCTGCCACGTCAAATAGCAATTAGACAAGAACAAATGTTCGTGCAGCAGCAGGTGAGGACTGTAGCCCCTCAGGTGATCGTGGTGCAGCCACAGAGGGTTGTTGTTTTGGGTGACACACCAACAACGACTGTGTGCCGGTACTGCCGTAAGAGCATCATCACTAATGTGAAATATAAACCCGGTTGTGCTGCATGGGGCATGTGCCTCTTATTAACTGTAGTTGGGGGGTTTCAAGATGCCCATCACACCTGTCCTTACTGCCGCAGGCATTTGGGAATATATGTCCGCAAATGACTTTCCAAACTCTCATCCACACATTCAACATTATGATCAATAATCACAAGCCAAAAAACATTATAGAACAGATATCACTAATTTTAGTTAAACAAATCATTAAAACAATTATAATGCAAAACATATTTGCTTAGTTAACAATTAGCTTAAAAGTCCTATTACCGTAATTACGAGTTTACAGGTTAGAATCACAAGTTGGAATCTCGTAATTATGACATGGTGTGAACTCACCTTTAAGCTGTTTTAAAGATCTAAACTGTTACACTAATTAATATCATTAATTTTAATGTATAATTTTTTCTACCTCCTTTAAAAAAATAGAAGATATTATGTTCAATATTATATTTACCAAGAAAATGGCACTTTCAAATGCTGCATGTTAAAACATTAAGTAGGCCTATAGACTATTTTTGATCATGACAGCATAAATGCCTTGAAGGATTTAAAACATTCATTATGTTGCATCACCCTAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_01303949_01305865.mRNA True 3002 mRNA 0.35 4 1301907 1306339

Neighbor

gene id symbol gene type direction distance location
CI01000300_01275725_01282289 NA coding upstream 19479 1275365 ~ 1282428 (+)
CI01000300_01272675_01273342 NA coding upstream 28154 1272675 ~ 1273753 (+)
CI01000300_01241607_01253459 RGS11 coding upstream 47898 1241607 ~ 1254009 (+)
CI01000300_01225430_01228695 PMM2 coding upstream 72920 1225430 ~ 1228987 (+)
CI01000300_01128973_01131417 ELFN1B coding upstream 170466 1128812 ~ 1131441 (+)
CI01000300_01331788_01335474 NA coding downstream 24020 1330359 ~ 1335569 (+)
CI01000300_01343814_01353541 TRIM2, TRIM2B coding downstream 37475 1343814 ~ 1355389 (+)
CI01000300_01373306_01377544 FGB coding downstream 66881 1373220 ~ 1377648 (+)
CI01000300_01390134_01416227 LRATB coding downstream 83385 1389724 ~ 1416713 (+)
CI01000300_01419087_01421103 LRATB coding downstream 112748 1419087 ~ 1421332 (+)
G408607 NA non-coding upstream 9449 1291816 ~ 1292458 (+)
G408588 NA non-coding upstream 46931 1254776 ~ 1254976 (+)
G408587 NA non-coding upstream 49438 1252104 ~ 1252469 (+)
G408586 NA non-coding upstream 51724 1249980 ~ 1250183 (+)
G408585 NA non-coding upstream 57558 1244119 ~ 1244349 (+)
G408609 NA non-coding downstream 18523 1324862 ~ 1325451 (+)
G408614 NA non-coding downstream 29465 1335804 ~ 1336027 (+)
G408620 NA non-coding downstream 74223 1380562 ~ 1380835 (+)
G408628 NA non-coding downstream 136285 1442624 ~ 1442884 (+)
G408634 NA non-coding downstream 155816 1462155 ~ 1462416 (+)
G408498 NA other upstream 281173 1017067 ~ 1020734 (+)
G408510 NA other upstream 324808 976600 ~ 977099 (+)
G408910 NA other downstream 326691 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 443561 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1007070 2312515 ~ 2321088 (+)
G409984 NA other downstream 1965346 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2594849 3901148 ~ 3902892 (+)

Expression


Co-expression Network