CI01000300_03752633_03755353


Basic Information

Item Value
gene id CI01000300_03752633_03755353
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3752633 ~ 3756860 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_03752633_03755353.mRNA
TGTTTCAGCACTGCAGCATCGGTGCATGTACATGTGAGCAGCAGGAGTGCCGCAGGACACCGCGCGCGAGACCCGCACCGTCACGCCACAGGACATTCGTCTCTCTCCCACTCTCGAATACAACCACAACATGTGTCGGAGCCTCAGCCCTCTTATCTGAGGCCGGAGCACAGGTCTCGACAACCGCAGTATCCGGACTGCCAGATACCGTTTCGTGGACATCATCACGCACTGAGCCAGAATGTCAAAAAGCTCGGCAGAAAGTCAGAGCAGGGGCGGCTCCGTCCGAGACGTGAGGATGGCCTCTTCCAACAATACCTCACCCGAAGGAGGCTCTCCACCCCACCAGAACCGCATCCGCCAGGTCTAAAAATAGGCTACCATCAGTCTAGTCATTTCTACTGCCACACTGGTTCCCCTCAGGAGTGGGTAGTTTATTTCTACCTGCAGGGCTGGTTGGGCAGGCACTTCAACTACATGGAACCAGTTGTTAGCGGATGGAAGAGTGTCATAAACATTCCTGTACAGAACATTGTAGCGGGCAAAGTGTTTTAGTGTACTTAGGATGTTTAAGCTATTTGCGTGAGTAGGCAAATTTTATTTTTAAGTATATTGCATAAATATACTCAAAGAACGGACCTTTTCAAAGGTAATAACATGATTGTCCTTGTCGAAATAAAGTCTGGTTCACCTCACAGCGTATTCTGACTAAGAACCTTAGTTTCAGAAGTATTTTTCCCATTTATTTTTATCATAACTATTTTCAAAAAAGTCTTAATTACATGGTTATAAGCCTTGAACCAAACCAACCAGCTACGAGGTGAATCAAACTTTGATTTGAAGCAAGAAAAGGGTTTGAAAATTGGACAAAAAGACAAAAGTACAAGACTGTGACAGCTTTAAAGGGTTAGTTCACCCAAAAATGAACATTCTGTCATTTATTACTCACCCTCATGCACTTCCACACCCGTAAGACCTTCGTTCTTCTTCAGAACACACATTAAGGTATTTCTGATCAAATCCGATGGCTCAGTGAGGCCTCCATTGCCAGCAAGATAATTAACACTTTCAGATGCCCAGAAAGCTACTAAAGACGTATTTATATACCAATATACTACAGTGGTTCGAAGTGTGTATCAAACTGCCAAAGTCACGTGATTTCAGTAAACGAGGCTTCGTTACGTCATAAGTGTTTCGAAATTTCAATGGTTCACCACTGGGGGTGCGTGACTTTGGCAGTTTGATATACGCTCCGAACCACTGATTTGAAACAAAATATTTATAAAGCTTCGAAGCTTCATGAAGCAGTGTTTTAAAATTGCCCATTTGATTATGTACTTGTCCATTTCGTTGTGAGTGTCGGGAGCTTGCTGAGAGAGCCCACCCACGCGCTTTTCTGATTGGCTGATTTTTGATTGACATTGTCGCGTCTCATAGTCGCGTCACATCTAAATTGCTTGTCGCTGGAATCTTATTGCATCGCGTCTGGTTAGGACACGGTGTAACAATGAACTCTTGCTGTATATACTCTTGTGTACTGCATGTTGATTTTTTTGTTCTTCCTTGTCGTTCATTTGTCATCTTTGCTTTATTTTATGCGAAGCATTTTTTTGCTTCACGTCGGCTAGATAAAGAGACATCCTCTTTTACATTGTGTTTGTGTATTTTGGGGGTGGAGCAATAAGGGGAGGGGTGTGTTTGTTTGGGTTGATTTGAAATATCAACAGTGTTTCTCAGAAATCGCTTACTGTACCTTTAATGAGGGAAGAACTACAATACAATGAAGTATTGCAAATGACAATCTAAATAAAAATGATTGATAGATAGATATAAAATCACTGATTTAAAGATGTTGATTATGTATGTAGAATCAATATATTTTATTTTTGTTGCAAAATATGCCGTCTGGCCACAGTTAAATTGTTTATATATGCTGTTTAGGAGTGGGTTTATCTAAAATGGTTGATACCACAATAATGTGGATAAAATGTATTCAAATGATTGTACAGCAGTGTCAACCTGCAACTGGCTGAACAGAAAAAATTGAAAACTCTAAAAAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_03752633_03755353.mRNA True 2062 mRNA 0.41 2 3752633 3756860

Neighbor

gene id symbol gene type direction distance location
CI01000300_03744731_03749017 NA coding upstream 3610 3744410 ~ 3749023 (+)
CI01000300_03694786_03699730 NOCTB coding upstream 52660 3694786 ~ 3699973 (+)
CI01000300_02990347_03008777 PCDH10, PCDH10A coding upstream 743769 2989698 ~ 3008864 (+)
CI01000300_02772428_02774786 NA coding upstream 977659 2772307 ~ 2774974 (+)
CI01000300_02744370_02753382 CLTA coding upstream 998680 2744370 ~ 2753953 (+)
CI01000300_03769789_03773233 NA coding downstream 11339 3768199 ~ 3773262 (+)
CI01000300_03773519_03831065 NA coding downstream 16502 3773362 ~ 3831422 (+)
CI01000300_03901275_03902800 NA coding downstream 144288 3901148 ~ 3902892 (+)
CI01000300_03924558_03934407 PPP2R2CA, PPP2R2C coding downstream 167698 3924558 ~ 3935360 (+)
CI01000300_03954605_03969070 CRMP1 coding downstream 197745 3954605 ~ 3970439 (+)
G410263 NA non-coding upstream 33891 3707467 ~ 3718742 (+)
G410253 NA non-coding upstream 168519 3583880 ~ 3584114 (+)
G410242 NA non-coding upstream 198647 3553750 ~ 3553986 (+)
G410240 NA non-coding upstream 199598 3552829 ~ 3553035 (+)
G410238 NA non-coding upstream 200898 3551518 ~ 3551735 (+)
G410334 NA non-coding downstream 119032 3875892 ~ 3876102 (+)
G410335 NA non-coding downstream 119825 3876685 ~ 3877036 (+)
G410345 NA non-coding downstream 154514 3911374 ~ 3913993 (+)
G410320 NA non-coding downstream 159901 3916761 ~ 3938947 (+)
G410323 NA non-coding downstream 182177 3939037 ~ 3939682 (+)
G409984 NA other upstream 480235 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1438739 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 1993597 1753916 ~ 1754980 (+)
G408910 NA other upstream 2117664 1633030 ~ 1634969 (+)
G408498 NA other upstream 2731899 1017067 ~ 1020734 (+)
G410382 NA other downstream 366838 4123698 ~ 4124416 (+)
G410388 NA other downstream 438786 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 2134207 5891021 ~ 5892824 (+)
G411777 NA other downstream 2712385 6469245 ~ 6469705 (+)

Expression


Co-expression Network