CI01000300_03769789_03773233


Basic Information

Item Value
gene id CI01000300_03769789_03773233
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3768199 ~ 3773262 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_03769789_03773233.mRNA
GTTTAAAAATACAGGATTATATATATATATATGTTGCATTTATTTGAATTTGTTAATTTTGTAGTGTGCATTTTAATTTGTGAAGTGTATATTGTGAATGTTAATTAGGTTATGCATTGTGAACAGGATTAACACTGCTGATTAAAGGTGTGGGAACGCTAAGATTTATTAATGTTTATGCTCACCAAGGCTGCATTTATTGATCAAAAATACATCGGAAAAGAGGGGGAAAAGCATGCCCCTCCGAATGATCTCCAACAGGTGCAGGATCAAAACAAATATGAAAATAAACAAGGAAAATCCGCACACTGTTTAACTATACCCTTTATTTTCAAAATAAAACAGCAATGTTTCGAATAAAGGTGCCTGAGGAAGATCTTTATTGATCGAAACTTTGCTGTTTTATATTGCTTAATATTTCTATATGTGGAATCTTGTGTAGCATTATAAATATATTTACTGTAACTTTGTAATTTAATGCATCCTTGCTGAAAAAAAACTGACCCCAGTGCAGTTATTTTGAGACTATCCTGTCTCTGAGAATCAGAGGCAGCTTAAGTGAGATCCTTACTAAGGAACAGTGACATTATAGTGACATTATAGATTTCTTCCTTCATAGCATCTGCAGTAGTCGCAGACCCCTTCAGATCCAAGGGGATTTATAGTTCAATCCCCCTACAGCATCCTGCAGATTAAGTGTATTTCTTAATGGCACAATTGTGATGCCAAATGCTCCTTGCTGACCCTCTGATCATCAGCCCTGGGCATTTACCACAATGCCACACCACCTCACCAGGTTGGCTCTGTGATTTCAGTAGCTGTATGTCGGAGAATACCTTTCCCCTCCAGGTGGATTTGAATATGTAACTTGCTGTAGCCCCAGTGTATTCATTCCCAGTGTTTCTCGCTGTCCCCTGACAGCCTCCGCTGTGGTCTTCCCCAAACTCCTCCCCAGCGCCGATGAGCACGCAATGTGCCACAGGTGTCCCTGTAGACCAGCTGTTTGTCGTGCTCTCGCTATTATCAGTTTCACATTTTTTTTCTCTAAAACAAAAGCTTTTTTATTGTGCCTCTACTCTTATACACACATTTGTGAGGCACACTCACATAGACTCAATCCTTAAGCTTTATTCGACACTATAGCTGGATGCCTCTACATCTGGACAGGCAGGTCAGCCCTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTATGGTCCCTGTTTCACACATGGCGATATAAATTCAGATTCCACGAGTGAGGCTTTTCTCTCTTCAGTCAACCAATGGACCAGACTATCTCTCAGTGGGGGGAAAAAGAGACAAACTGTTTGCACTGAAGAGAGAATTCACAGTGGATCAGAGTAGTTAAGTTATTCCGAGTGAATTGTGGGAGGACAGTGGTACAGAGCGTCTGTTATCACCTTATTCAGAGGAGGCACATTAGTAAGAGCTATTGGGAAAAGCAGAACAAGGACTCCATCCGTTGCTTTACATTAATATGATAAACTTTCTGGGACTGTTCCACATCTGAAGTCATAGAGGAGTACCTGTGTTCGGTTTTCTGTGGTTTGGCATCATGGCACACGCAGCAGCACACCTGAAAAAGGCACGGGAACTAGAACAACCTCCTGAGATAAAGGCTCTCGCCAAAGCCAGAGAGAGACGCAAGAGACACAGAGAGAGAGCAGAGCGCAAACGCAAGAGTTCACTATGCTTAGTTCACTACAGCCCCAGTACTGTAGTAAAACCCATATGTACATTGGTTAAAGGTAGGTCAAGATTTTTTGACTTCAGTTGTCCCGGTGGATGCACATTCCTGGACCTCAGGAGGAAAAGGACAGGTTTCCCAGCTGGCTCTTCCCCAGCAGGATTGCCCTTTGCTGGGCCTTGCTCTGTCTGCCTGAGCGTGGAAGGGTTAAAAATAACCCAGCCCTGGACCCCGGACAGGGCGGATATTCGGCCTGATATAGCAATGGGAGACACGTTTACGGCCGCAGTTGTCAGTCACAAAGCCAGGCGGGAAGAGAGACAAGACTGGAAAAGAAGAGGAGACAAGAGCCAATACAGGACACAGATTCTCACAGAAGACGCGGGGCAGGGATCAGAGAGAGCACATAAGAGATGATGTTTGGGACCTGAGGAGAAAGATAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_03769789_03773233.mRNA True 2168 mRNA 0.44 3 3768199 3773262

Neighbor

gene id symbol gene type direction distance location
CI01000300_03752633_03755353 NA coding upstream 11339 3752633 ~ 3756860 (+)
CI01000300_03744731_03749017 NA coding upstream 19176 3744410 ~ 3749023 (+)
CI01000300_03694786_03699730 NOCTB coding upstream 68226 3694786 ~ 3699973 (+)
CI01000300_02990347_03008777 PCDH10, PCDH10A coding upstream 759335 2989698 ~ 3008864 (+)
CI01000300_02772428_02774786 NA coding upstream 993225 2772307 ~ 2774974 (+)
CI01000300_03773519_03831065 NA coding downstream 100 3773362 ~ 3831422 (+)
CI01000300_03901275_03902800 NA coding downstream 127886 3901148 ~ 3902892 (+)
CI01000300_03924558_03934407 PPP2R2CA, PPP2R2C coding downstream 151296 3924558 ~ 3935360 (+)
CI01000300_03954605_03969070 CRMP1 coding downstream 181343 3954605 ~ 3970439 (+)
CI01000300_03972562_03976190 NA coding downstream 199300 3972562 ~ 3976225 (+)
G410263 NA non-coding upstream 49457 3707467 ~ 3718742 (+)
G410253 NA non-coding upstream 184085 3583880 ~ 3584114 (+)
G410242 NA non-coding upstream 214213 3553750 ~ 3553986 (+)
G410240 NA non-coding upstream 215164 3552829 ~ 3553035 (+)
G410238 NA non-coding upstream 216464 3551518 ~ 3551735 (+)
G410334 NA non-coding downstream 102630 3875892 ~ 3876102 (+)
G410335 NA non-coding downstream 103423 3876685 ~ 3877036 (+)
G410345 NA non-coding downstream 138112 3911374 ~ 3913993 (+)
G410320 NA non-coding downstream 143499 3916761 ~ 3938947 (+)
G410323 NA non-coding downstream 165775 3939037 ~ 3939682 (+)
G409984 NA other upstream 495801 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1454305 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2009163 1753916 ~ 1754980 (+)
G408910 NA other upstream 2133230 1633030 ~ 1634969 (+)
G408498 NA other upstream 2747465 1017067 ~ 1020734 (+)
G410382 NA other downstream 350436 4123698 ~ 4124416 (+)
G410388 NA other downstream 422384 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 2117805 5891021 ~ 5892824 (+)
G411777 NA other downstream 2695983 6469245 ~ 6469705 (+)

Expression


Co-expression Network