CI01000300_03981015_03991839


Basic Information

Item Value
gene id CI01000300_03981015_03991839
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3981015 ~ 3992010 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_03981015_03991839.mRNA
ATGAAGGTGAAAGTAAAGAAACTGAAGAAGAAGAGGCCAAACTGACAGCAGCCATCAGGGCATATGGGGGAACTCCAGTGAACCTGAACATAAAGTCAGCTGGCAGCAGAGCGTATGGAGCAGGTTCTAAAGTGAAGGGCGTAGACCTCGAAGCTCCAGGCAACATCAATGGAGTTCCAGTCCTGGAAGTGGACATGGAGTCCTTTGAGGAGAAACCATGGAGGAAGCCAGGTGCGGACTTGTCTGACTATTTTAACTATGGTTTTAATGAGGACACGTGGAAAGCATACTGTGAAAAGCAGAAGAGGTTACGCATGGGCCTCGACATTCTCAACATTGGATCCACCACCAGCAAGATCTCAGTTCAGCAGGGTCGTACAGGTAACAATGAGAAGGAGATCACAATACCAGCTCATGCATCTAAAGCAGACTTTTCCACTCCATCCAACCTGTATAAAACAGGAATCAACCCAGCAAGGAAGACGCCCGGGACCATTGATGTGATTGGAGGACAGACTGCCACTATTAGCAGGGTGGAAGGAAGACGTCGTCACAATCTGGAGGGGAATAACATCCAGGTGATCTCGGAACATCCCAGCTCTGAGGCTGAACCCGCTGTGGCTAAGATGCCACCACCTTTCTTTCCTCCAGGGCCACTGCCACCCAACATCCCCCCTCCTCCATTCCTCCCTCCTCCTGTCAGTCAGGCTCCACCTCTAATCCCGCCTCCACGGATGCCTATCACTGTTCCTCCTCCCAGAGGACCTCCTCCTTCACTGATACCTACTATGGACAACAGTGGGCACCCAGGAGGATATGATGGGCGTCCTGTTGCTCCATACCCTTTTCCTACAGGTGGGTTTCCTCCACCCATGCAAGGAGCTGTTAGCCCCTGGCCCGGTTTGATGGACAACTCAAAGCATGATGAAGAACGGTATCGTTCTTACCGTGACTATGGAGACAGAGGGTACGAGAGGCATCGGGAGCGAGCGAGCCGTGAGAAGGAGGAGCGGCACAGAGAGAGGAGACACAGAGAGAAAGAGGAGGGGAGGCACAAGTCATCACGGAGCAGTAGCAGACGGAGACATGACAGCGAGGAGGGTGACAGTCACCGGCGCCACAAGCACAAGAAGTCCAAGAGGAGCAAAGAGGGCAAGGAGCCCAGCGAGGAGCATTCTGTTGACCAGGAGAACCAGGAGGCCATGGAGTAACTCCTGTCTGTCTTCTCCGCTCCTCTTTCTTCTTATCAAAGCGCTGGTTGTCAACCAAATCATGCTAAATGATACTATAATCCAGTTTACCTTCCTTTTGTTTTCATGTTTCCTTTTTTTTCGTTGTTTTTTTCCAGTGCAGTTGTACCATGTAGATGTTGATTTGTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_03981015_03991839.mRNA True 1382 mRNA 0.51 13 3981015 3992010

Neighbor

gene id symbol gene type direction distance location
CI01000300_03972562_03976190 NA coding upstream 4790 3972562 ~ 3976225 (+)
CI01000300_03954605_03969070 CRMP1 coding upstream 10576 3954605 ~ 3970439 (+)
CI01000300_03924558_03934407 PPP2R2CA, PPP2R2C coding upstream 45655 3924558 ~ 3935360 (+)
CI01000300_03901275_03902800 NA coding upstream 78123 3901148 ~ 3902892 (+)
CI01000300_03773519_03831065 NA coding upstream 149593 3773362 ~ 3831422 (+)
CI01000300_03994394_03997804 CHIC2 coding downstream 2384 3994394 ~ 3998763 (+)
CI01000300_04008515_04015444 SLC34A2A coding downstream 14967 4006977 ~ 4015556 (+)
CI01000300_04021130_04027987 RBPJ.S, RBPJ, RBPJA coding downstream 27865 4019875 ~ 4029609 (+)
CI01000300_04035454_04049805 STIM2A coding downstream 42307 4034317 ~ 4049821 (+)
CI01000300_04054526_04057476 NA coding downstream 61488 4053498 ~ 4057513 (+)
G410359 NA non-coding upstream 1746 3979044 ~ 3979269 (+)
G410354 NA non-coding upstream 27601 3953176 ~ 3953414 (+)
G410353 NA non-coding upstream 27970 3952830 ~ 3953045 (+)
G410323 NA non-coding upstream 41333 3939037 ~ 3939682 (+)
G410320 NA non-coding upstream 42068 3916761 ~ 3938947 (+)
G410366 NA non-coding downstream 27526 4019536 ~ 4019741 (+)
G410383 NA non-coding downstream 58437 4050447 ~ 4053321 (+)
G410368 NA non-coding downstream 91008 4083018 ~ 4085182 (+)
G410375 NA non-coding downstream 135166 4127176 ~ 4129355 (+)
G410649 NA non-coding downstream 278305 4270315 ~ 4270720 (+)
G409984 NA other upstream 708617 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1667121 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2221979 1753916 ~ 1754980 (+)
G408910 NA other upstream 2346046 1633030 ~ 1634969 (+)
G410382 NA other downstream 131688 4123698 ~ 4124416 (+)
G410388 NA other downstream 203636 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1899057 5891021 ~ 5892824 (+)
G411777 NA other downstream 2477235 6469245 ~ 6469705 (+)
G413459 NA other downstream 4952473 8857687 ~ 8948603 (+)

Expression


Co-expression Network