CI01000300_04054526_04057476


Basic Information

Item Value
gene id CI01000300_04054526_04057476
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4053498 ~ 4057513 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_04054526_04057476.mRNA
TTATATATAGGTCAAATGATTCTGACTTATCTGAGTAGTTCTGGGTCATACTGAGCCTTCAGTGTGATTTATTTAGTCTCATTTCGAAGGCTGCATCCTCTGGAGGTTGCTTTTGTTGGCCGCATATGTCATAAAGGCTGCATTATTTCAGTAAAGTACCCATTACATTCCAAAGTCATTGAGAAATTACAACAATTTACGCTTCACAAGGAATAACAGTCAATTTTATAACGGTTACTTTTCTGAAATAGGTTATCCTTGATGACGTATGCAGCCAACAAATGCGACCTCCGGGGGACGCAGCCTTCGAAATGAGACAGATATAGTCAGAAGTCTTCTGCTTTTTTCTATAACTAATTTTAGAAAATCATGATGCTATCAAAAAAGGGGGTTTCCAGTATGTTATGATGATTTAGTACTGTTCACAGGTTTTTGTAAAGTGGTTAATCATGCTTTGTTGTTGTTGTTTTTAACCACAAATGTTTCCAGTGTTTTTTCTTGAGAATTTGTATGTTTATCTTTATCTCTGTGTGTTAATATACAGCTGTATGGACTTTAATATTATTATAGACATGAGTAATCAATTGCATATTTGAGGTTAGATTTTTAACCTGCAGAAATATTTTTTATATAATATTTATATATTTTTTCCCCTAACAATTCAAGTAAGCATGTCAAATTGAATCATGTGGAAACAGGAAAACCACAACCTTTAGATGATCGCAGTCTGCTTAGCTTGATCTGTTTAGATGACAAACCTGTATTGAAAAATATGTGGTTAGAGGCTGTTTATTAATAATGGTTGTAATATTTAAACAAACATTATGACCTTTTTTGAAGAAAGAGGTATGAATAAAGTACACAGGGTGTTAGATGTGACTGATGAAACAGGATGTGACAATAGGTTTCCTGTTATGGCCTGCTTGAATGTTGATACCTCTGAAATTCTTCTAAACGGCTTCTAAATGACATTTAAACCTCGACATGTTGTTGCCAGTTAGATTATATCAGTTCACCTTCAGTTAGACATGAACTGTATGGCACAACTGATCTCTGATGTGCTGAAAATACTTGGTAAAAATGTCAGCCAGGCGACATGCGCTTTGAAGACCCTCGTTCTCATCTTATCAGCCACTAAAATGGAGCGAGCAATAGTCATCACACTTGTGTGTGTTTTGTTCTGTGAACACCAGAGAGTGTTTGGGACAGAAGTGGACATGAGAGTTAAAGCAGGAGACAACATCACTCTCTACTCTGACTGTGCCGTTCCTCTTGGATCACACATTGTTTGGTTGAGAAACTGCTCACATGAGCATCAACCATCTCTGTTAATAGAGACTATAAACCTGTTCCAGGGGACGTTTCCACGTTTCAGTTTTGTGCCCAACAGCTCCAGTAACTCCTATGATCTACATATAGAGAATGTCAGTGTCTCTGATGAGGGAATATATTACTGTGCAATAGACGAAAGAAAAGTAAATGATGTACTTGGCTTCATAGTCTCACAGTACAAGTATGGAAACAGAAGAACTCGTCTTTCTGTCTTGGAGTTAAAGTCTTCTCACACTGAGAGGTTCAACACCACCTCCACTCCTCCTGTATCAGACCTCTGCTGGACGCTGCTGTTCAGTGTGTGTCCGGTGTGTGTTCTTCTCTTCTCCATCTGTGTCTTCTGCCTCTGTCAGAGGAAAACTACAGTTTCTGCAGCAACACAGACTGAGAATGGACTTTTTGAGGTACTGCATTACTTGTGCACATCCTGATAACCCATGTATCAAACATTTCTCCATTTTTCAACAA

Function

NR:

description
hypothetical protein EH28_18016

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_04054526_04057476.mRNA True 1800 mRNA 0.38 5 4053498 4057513

Neighbor

gene id symbol gene type direction distance location
CI01000300_04035454_04049805 STIM2A coding upstream 3677 4034317 ~ 4049821 (+)
CI01000300_04021130_04027987 RBPJ.S, RBPJ, RBPJA coding upstream 23889 4019875 ~ 4029609 (+)
CI01000300_04008515_04015444 SLC34A2A coding upstream 37942 4006977 ~ 4015556 (+)
CI01000300_03994394_03997804 CHIC2 coding upstream 54735 3994394 ~ 3998763 (+)
CI01000300_03981015_03991839 NA coding upstream 61488 3981015 ~ 3992010 (+)
CI01000300_04100876_04103178 NA coding downstream 43363 4100876 ~ 4104415 (+)
CI01000300_04105718_04107800 NA coding downstream 48205 4105718 ~ 4107849 (+)
CI01000300_04211928_04219961 NA coding downstream 153656 4211169 ~ 4220143 (+)
CI01000300_04391216_04429569 PCDH7A coding downstream 333245 4390758 ~ 4430154 (+)
CI01000300_04439356_04442462 NA coding downstream 381705 4439218 ~ 4442690 (+)
G410383 NA non-coding upstream 177 4050447 ~ 4053321 (+)
G410366 NA non-coding upstream 33757 4019536 ~ 4019741 (+)
G410359 NA non-coding upstream 74229 3979044 ~ 3979269 (+)
G410354 NA non-coding upstream 100084 3953176 ~ 3953414 (+)
G410353 NA non-coding upstream 100453 3952830 ~ 3953045 (+)
G410368 NA non-coding downstream 25505 4083018 ~ 4085182 (+)
G410375 NA non-coding downstream 69663 4127176 ~ 4129355 (+)
G410649 NA non-coding downstream 212802 4270315 ~ 4270720 (+)
G410659 NA non-coding downstream 250057 4307570 ~ 4307813 (+)
G410710 NA non-coding downstream 347288 4404801 ~ 4407968 (+)
CI01000300_03901275_03902800 NA other upstream 151347 3901148 ~ 3902892 (+)
G409984 NA other upstream 781100 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1739604 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2294462 1753916 ~ 1754980 (+)
G408910 NA other upstream 2418529 1633030 ~ 1634969 (+)
G410382 NA other downstream 66185 4123698 ~ 4124416 (+)
G410388 NA other downstream 138133 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1833554 5891021 ~ 5892824 (+)
G411777 NA other downstream 2411732 6469245 ~ 6469705 (+)
G413459 NA other downstream 4886970 8857687 ~ 8948603 (+)

Expression


Co-expression Network