CI01000300_04105718_04107800


Basic Information

Item Value
gene id CI01000300_04105718_04107800
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4105718 ~ 4107849 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_04105718_04107800.mRNA
ATGGGGATATTTCAGCGTTACAACTTTATCCACAACCGCTCCAGTAATTCTTATGATCTACATATTACTAACATCAGTGTCTCTGATCTGGGACTGTATTACTGTGCAGAAGTAGAGAATAAGGTAAATGCAGATGAAAAAGGCATCATCTCCTCATCTAAAGTGTACTATTATGGAAACCAAACATCTCGTCTCTCTCTTGCAGAGATCTTTACCTTACCTTTTTCAACATACGTTCATATTGACATTGATACATTCTGTTTATTTTATATAGAGCAAGTAACCCTGAACATTCCTATATCAGACCTCTGCTGGACGCTGATGTTCAGTGTGTGTCCGGGGGATCCTACAGAGAAACATCAGTGTGAGACGAGTAAAACTGGAAAGATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTGACATCTTCATATCCCTATGCCAAGATCTATAAGTACCAACCACAAATGTTTCCACTGGACCCTATCAACAGAAATGCACAAATTGACAGAACCACAACTATTTTTCAGTAGAATTAAAATGTGATCTATTCCATGTGCATAAAGCTAATGCACACATGTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_04105718_04107800.mRNA True 583 mRNA 0.39 4 4105718 4107849

Neighbor

gene id symbol gene type direction distance location
CI01000300_04100876_04103178 NA coding upstream 1303 4100876 ~ 4104415 (+)
CI01000300_04054526_04057476 NA coding upstream 48205 4053498 ~ 4057513 (+)
CI01000300_04035454_04049805 STIM2A coding upstream 55897 4034317 ~ 4049821 (+)
CI01000300_04021130_04027987 RBPJ.S, RBPJ, RBPJA coding upstream 76109 4019875 ~ 4029609 (+)
CI01000300_04008515_04015444 SLC34A2A coding upstream 90162 4006977 ~ 4015556 (+)
CI01000300_04211928_04219961 NA coding downstream 103320 4211169 ~ 4220143 (+)
CI01000300_04391216_04429569 PCDH7A coding downstream 282909 4390758 ~ 4430154 (+)
CI01000300_04439356_04442462 NA coding downstream 331369 4439218 ~ 4442690 (+)
CI01000300_04443587_04462530 HGSNAT coding downstream 335738 4443587 ~ 4462719 (+)
CI01000300_04465330_04479739 PI4K2B coding downstream 357249 4465098 ~ 4481238 (+)
G410368 NA non-coding upstream 20536 4083018 ~ 4085182 (+)
G410383 NA non-coding upstream 52397 4050447 ~ 4053321 (+)
G410366 NA non-coding upstream 85977 4019536 ~ 4019741 (+)
G410359 NA non-coding upstream 126449 3979044 ~ 3979269 (+)
G410354 NA non-coding upstream 152304 3953176 ~ 3953414 (+)
G410375 NA non-coding downstream 19327 4127176 ~ 4129355 (+)
G410649 NA non-coding downstream 162466 4270315 ~ 4270720 (+)
G410659 NA non-coding downstream 199721 4307570 ~ 4307813 (+)
G410710 NA non-coding downstream 296952 4404801 ~ 4407968 (+)
G410733 NA non-coding downstream 421183 4529032 ~ 4560250 (+)
CI01000300_03901275_03902800 NA other upstream 203567 3901148 ~ 3902892 (+)
G409984 NA other upstream 833320 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1791824 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2346682 1753916 ~ 1754980 (+)
G408910 NA other upstream 2470749 1633030 ~ 1634969 (+)
G410382 NA other downstream 15849 4123698 ~ 4124416 (+)
G410388 NA other downstream 87797 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1783218 5891021 ~ 5892824 (+)
G411777 NA other downstream 2361396 6469245 ~ 6469705 (+)
G413459 NA other downstream 4836634 8857687 ~ 8948603 (+)

Expression


Co-expression Network