CI01000300_04211928_04219961


Basic Information

Item Value
gene id CI01000300_04211928_04219961
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4211169 ~ 4220143 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_04211928_04219961.mRNA
TTATAAAAAGCATCACACTCTTTTGTGTATTGTGTAGCTGATTTATCATATGAAGTATTGATCTTCACATGTTTAGAATATAATTCAGCTAATTTCAGCTCAATGGACTGCTGTCAGTGTCAGTATAACCACAGACAAGCTGAGCAAGCTTCCTTCGTGCAAATGTGTGAACTCCAACTCACAAAACCACACATAGTCTAATGGAAACATTTGTGCTTGTTGACCAGTGATTAAGTAAGAGATGTGAAGTGAGAGTTTGACGACATGTCACAGCAGCAAATGTGAAGGTGGTCTGAATATAAGAGTTGTGGTTTCCTGTTTTGACATGTTTACACGTTGCTGGTTTGTACCCACTACAACAGAGAACATCATGAATTTTACAGCTGAACTTCAATAATAATAATAAAAAAAAAATGACCAATTGAAATGTAAAGCACAAAATATCTCAAGTGAAGATGATTATCTGCATGAATCAAAATTATTTGATACTAAACATATCTATCATATCTATAAGACAAACAAAAGTATTACCCCCTCTTCATTTCTGTTATTTGATGATTTCTGTTTTTGTAAACCAATCAGAGCAGGGTAACCAATGATTGGTTAATACTACTCTTTGTACGTACACATGATATTGACCAACCCCTCTGTGACATGAAACATTTTAGAAAAGATTTTCCATTGACGTGAACCAATCAGATGAGAGCTGACGTCTGTAAGACCCTCACCAGTGTCAGTTATTCACAGTCACTCACAGAGATGGAGAGGTCAAGACTTGCTCTCGTCACACTCATGTGTGTTTTGTTGTTCAGTCAGAACAGAATCTATGGAGCAGAAGTGGAGATGAAAGTCAGACCAGGAGACAACATCACTCTCTACTGTGATCGCTCTGTAACTCATGGTTTCCGCTTTGTATGGATAAGAAACTGCTCTCATGAAAATCAACCCTCTCTCATAATAGATTTAATGAAAGAGGGCCTTGAGACATTTCAGTGTTTCAGCTCTGTCTACAACCGCTCCAGTAATTCTTATGATCTACATATTACTAACATCAGTGTCTCTGATCTGGGACTGTATTACTGTGCAGAAGTAGAGGATAAAGTGTATGAAGATGAAAAAGGCAGGACCTCCCGATTTGAAGTGTACCATTATGGAAACCAAACAACTCGTCTCTCTTTTGCAGATGCTGCGGCAGATCAAAAAGACAATTTGAAAGGTAGAAATACCATTGAGGGTAAGGATGAAGAGGTGTGTTATGCATCTTTAGACGTGAAAACCAGGAGACAAAAACAACGCAAGACAAAGCGAGTGCAGTGTTCAGACTTCAGTACATATGCTCAGTGTCGCTCGCTCTCGGACAACTCGATTTCTCGCGCGCGCACATTCGGTCTCTCTCGTGCAGAGACTCATGGTGTTCAGAGCCTCTTGGATAAAGACATAGTGGAAAAAGACACTCAAAAGCCTAAAAGAGAAGGAGTGTAGAGGACAGTGATCTTATACATCCAGTGCTGTAGGGGTTGAAAGGGCTGCTGTCAAAATAGAAGCAGCGTTTTAACTTGAGTAGCATTTTCACTAGATCCAATGACCTATAAAGTAAATGTACATTCAAACTCAGAGTTTCTCCATGTGGGTATGTTTCTGTAGAATGACTAACACTGCTACAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_04211928_04219961.mRNA True 1664 mRNA 0.39 7 4211169 4220143

Neighbor

gene id symbol gene type direction distance location
CI01000300_04105718_04107800 NA coding upstream 103320 4105718 ~ 4107849 (+)
CI01000300_04100876_04103178 NA coding upstream 106754 4100876 ~ 4104415 (+)
CI01000300_04054526_04057476 NA coding upstream 153656 4053498 ~ 4057513 (+)
CI01000300_04035454_04049805 STIM2A coding upstream 161348 4034317 ~ 4049821 (+)
CI01000300_04021130_04027987 RBPJ.S, RBPJ, RBPJA coding upstream 181560 4019875 ~ 4029609 (+)
CI01000300_04391216_04429569 PCDH7A coding downstream 170615 4390758 ~ 4430154 (+)
CI01000300_04439356_04442462 NA coding downstream 219075 4439218 ~ 4442690 (+)
CI01000300_04443587_04462530 HGSNAT coding downstream 223444 4443587 ~ 4462719 (+)
CI01000300_04465330_04479739 PI4K2B coding downstream 244955 4465098 ~ 4481238 (+)
CI01000300_05022837_05027540 NA coding downstream 802694 5022837 ~ 5028915 (+)
G410375 NA non-coding upstream 81814 4127176 ~ 4129355 (+)
G410368 NA non-coding upstream 125987 4083018 ~ 4085182 (+)
G410383 NA non-coding upstream 157848 4050447 ~ 4053321 (+)
G410366 NA non-coding upstream 191428 4019536 ~ 4019741 (+)
G410359 NA non-coding upstream 231900 3979044 ~ 3979269 (+)
G410649 NA non-coding downstream 50172 4270315 ~ 4270720 (+)
G410659 NA non-coding downstream 87427 4307570 ~ 4307813 (+)
G410710 NA non-coding downstream 184658 4404801 ~ 4407968 (+)
G410733 NA non-coding downstream 308889 4529032 ~ 4560250 (+)
G410776 NA non-coding downstream 436627 4656770 ~ 4658791 (+)
G410388 NA other upstream 14614 4195646 ~ 4196555 (+)
G410382 NA other upstream 86753 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 309018 3901148 ~ 3902892 (+)
G409984 NA other upstream 938771 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1897275 2312515 ~ 2321088 (+)
CI01000300_05891147_05892754 HELT other downstream 1670924 5891021 ~ 5892824 (+)
G411777 NA other downstream 2249102 6469245 ~ 6469705 (+)
G413459 NA other downstream 4724340 8857687 ~ 8948603 (+)
G414249 NA other downstream 6149768 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 6379793 10604458 ~ 10605033 (+)

Expression


Co-expression Network