CI01000300_09541949_09542458


Basic Information

Item Value
gene id CI01000300_09541949_09542458
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 9541490 ~ 9542749 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_09541949_09542458.mRNA
GTATATAAATTCCATTGTATAATGATATTCACATCCAATAGAAGATGTTGGCCTACAAAATAGTAAAAGGATATCTTCTACATCTCTCAACTGTTAATCTGTGAAGTAAATTGTACTGATTTAATAACACAGTTGTTAGGCCATCAAAGTGTATATAGTACACTAAACCAACTTAACTACACCATGTAAAATAAGCAGAAAATCATATTTAGCACGGCAGCTAAAACCACCCCCACTAAAACAACCAGCAATTGATTTGTAAATGATACGTATCTAACAAGATACGGATGTAGGGGGTGTGGAGAAGGAGGCAAGTCTCACCCCAGATCATGTTTCTACATATGTAAGAACAGCCTTCCTTGGATAAACACACACACACACACACACACACACACACACAGACACACACACAAACTTTCTTATCACAGGGCATCTGACGATTATAGGGGCTGATGGAAGATGAGACATATCCTGCTTTTACTGCTACTGTTTGTCAACCCTCATCAAAACCTGAAGCTGTTCTGTCTATCTCAGAGTCTTGTTTGTGAATCAGCATTGCTTTTTCTGTCCACGGTGCCCTGGGTTAGCACAGACGGGGAGGAACCTGATCTTGAAACAGCACATTTACACCCCGGGCAGATTTGTGAACAACACAAGCCATGGCCTAATAAAACATTCCCCCCAGAGACAGAGATGAGTCTCTCAGCAGGTCAGGAGGCTCAGGCCTCCGCAAAGTGGAAGAATAACAGGCAGAGGGTGGAGGGCAGAAACTCGAGCCTGGTGTGTCAGCGGTGGGCAGCGGGGGAGCGGACGTGCCAGGGACTCTGCAGTGACCCTCTCCCACCCCTCTCACCCCGACTGCCATCAATAACACAGCCCACTCTCTGTGACTGCCCTTCATTCTATAACCCTTTCACTTTTCTGTCTTTCTTTATCTGTTTTTACTTACTTTATGATATGACAATCTAGAGAAACAAACAAAAGATTAGATTATCGATTACACAATGATGATACCATGAAAGATCTAATTCTGCGCATTGCACCACGTGACATTTTACAACCTGAACTAGCCTTGTCTCGTCATAAAAAGGTCAAATTATCTAATATTTTGAAAGACTTACTGACCATGACACACAGTCATGAGGGTCTTTAGGGGTCCTCCATGATATAATTTCCTGTTTTATGTTTTTTTTCCTACATGTTGGTTGCACCACACACTTGATTTGGCAAACAAAAGACAAATATTAATATGCAGTTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_09541949_09542458.mRNA True 1260 mRNA 0.42 1 9541490 9542749

Neighbor

gene id symbol gene type direction distance location
CI01000300_09486849_09487928 MAB21L2.S, MB211, MAB21L1, MAB21L2, MAB21L1.L, MAB21L2.L coding upstream 53466 9485781 ~ 9488024 (+)
CI01000300_09389521_09391739 NA coding upstream 149137 9389521 ~ 9392353 (+)
CI01000300_09322462_09376575 SLIT2 coding upstream 163863 9322216 ~ 9377627 (+)
CI01000300_09282621_09306536 NA coding upstream 234724 9281908 ~ 9306766 (+)
CI01000300_09136541_09152739 NCAPG coding upstream 388330 9136541 ~ 9153160 (+)
CI01000300_09658054_09661559 RS3A, RPS3A.S, RPS3A, RPS3A1, RPS3A.L coding downstream 115305 9658054 ~ 9661711 (+)
CI01000300_09725667_09740001 FAM160A1, FAM160A1A coding downstream 181521 9724270 ~ 9742037 (+)
CI01000300_09765979_09766870 DCTPP1 coding downstream 223230 9765979 ~ 9767154 (+)
CI01000300_09893990_09906715 NA coding downstream 348339 9891088 ~ 9906738 (+)
CI01000300_10056666_10057133 NA coding downstream 513821 10056570 ~ 10057457 (+)
G413904 NA non-coding upstream 146583 9394650 ~ 9394907 (+)
G413903 NA non-coding upstream 147195 9394067 ~ 9394295 (+)
G413902 NA non-coding upstream 147628 9393001 ~ 9393862 (+)
G413901 NA non-coding upstream 148869 9392411 ~ 9392621 (+)
G414089 NA non-coding downstream 148926 9691675 ~ 9692431 (+)
G414114 NA non-coding downstream 229259 9772008 ~ 9772348 (+)
G414073 NA non-coding downstream 230413 9773162 ~ 9773839 (+)
G414127 NA non-coding downstream 268874 9811623 ~ 9811861 (+)
G414128 NA non-coding downstream 273186 9815935 ~ 9816158 (+)
G413459 NA other upstream 592887 8857687 ~ 8948603 (+)
G411777 NA other upstream 3071785 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 3649065 5891021 ~ 5892824 (+)
G410388 NA other upstream 5344935 4195646 ~ 4196555 (+)
G410382 NA other upstream 5417074 4123698 ~ 4124416 (+)
G414249 NA other downstream 827162 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 1057187 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 1103442 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 2160735 11704476 ~ 11708351 (+)

Expression


Co-expression Network