CI01000300_10604458_10604787


Basic Information

Item Value
gene id CI01000300_10604458_10604787
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10604458 ~ 10605033 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_10604458_10604787.mRNA
ATGTCTCCCCCAGAACCACCAGGAGAAAACACCGAGGGTGCTAAATGTACTCCAAAGAGAAAGAAGACAACGTTGGGTTGCTACTTTAAAACTATTGAACAAGACTTGCCAAGCCTACCTATCAACCAGAAACTAAGTGTAACTTGTGAGCTGCAGGCCTACTTACAGTCACACAACCTAGATAGTGAAGGGGATCCACTAAAATGGTGGAAGGAAAATGAAAAGGTCTACCCAAGGCTCTCAAAAGTGGGAAAGAAGTACTGGTGCATACCAGCCACAAGTTCCCCTTCAGAGAGGGCTTTTAGCATCCCTAAAAATGTATTATGTTGATAGGCTATTTCTAGCCAAAAACCTGTAACGTAACATACAAATACATGTAGGCTATAGAATTTGTGTATTCGTGATTGAAACATGTTTTTTCACATTGAACTTTTGTTATTTAATTTTGTTATTAACATTTGCCACGTGAAAGAGTCCCACTTTTATTTTTACCAGAATACATTTTCTTCAGAAATTTAAATGACTTTCAGAATTTATGTTCTGCTTATAACATGTATTATTTGGATGTAAAGTGAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_10604458_10604787.mRNA False 576 mRNA 0.37 1 10604458 10605033

Neighbor

gene id symbol gene type direction distance location
CI01000300_10496235_10498777 FABP2 coding upstream 105514 10496174 ~ 10498944 (+)
CI01000300_10445111_10492819 GUCY1A3, GUCY1B3 coding upstream 110916 10445111 ~ 10493542 (+)
CI01000300_10401994_10404248 NPY2R coding upstream 199783 10401565 ~ 10404675 (+)
CI01000300_10387736_10392987 LRAT, LRATA coding upstream 211416 10387176 ~ 10393042 (+)
CI01000300_10357507_10366851 PLRG1 coding upstream 237450 10357507 ~ 10367008 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 coding downstream 56647 10661680 ~ 10674265 (+)
CI01000300_10675299_10675754 NDUFB6 coding downstream 69556 10674589 ~ 10676912 (+)
CI01000300_10682604_10685243 TOPORSA, TOPORS coding downstream 76284 10681317 ~ 10685274 (+)
CI01000300_10688627_10696530 MTAP.L, MTAP coding downstream 83594 10688627 ~ 10696530 (+)
CI01000300_10764813_10766212 NA coding downstream 159100 10764133 ~ 10766249 (+)
G414444 NA non-coding upstream 48039 10555288 ~ 10556419 (+)
G414432 NA non-coding upstream 175314 10428815 ~ 10429144 (+)
G414424 NA non-coding upstream 184678 10419553 ~ 10419780 (+)
G414423 NA non-coding upstream 185319 10418559 ~ 10419139 (+)
G414425 NA non-coding upstream 188050 10416039 ~ 10416408 (+)
G414455 NA non-coding downstream 27694 10632727 ~ 10633580 (+)
G414488 NA non-coding downstream 95751 10700784 ~ 10701961 (+)
G414495 NA non-coding downstream 122207 10727240 ~ 10727441 (+)
G414496 NA non-coding downstream 128583 10733616 ~ 10738720 (+)
G414249 NA other upstream 230560 10369911 ~ 10373898 (+)
G413459 NA other upstream 1655855 8857687 ~ 8948603 (+)
G411777 NA other upstream 4134753 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 4712033 5891021 ~ 5892824 (+)
G410388 NA other upstream 6407903 4195646 ~ 4196555 (+)
CI01000300_11704476_11708232 NA other downstream 1098451 11704476 ~ 11708351 (+)

Expression


Co-expression Network