CI01000300_10675299_10675754 (NDUFB6)


Basic Information

Item Value
gene id CI01000300_10675299_10675754
gene name NDUFB6
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 10674589 ~ 10676912 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_10675299_10675754.mRNA
ATATAAAAGCAGTGTTGTGTCCATTTGTATTTTAAATAGAGAAAATTACATAAATTAGTTGTTTCATATGTAATCAAATTTAATAATGCATAATCCCATTCCAGAGTCTTACTGTGCTAAACGTTTTTCAGAGTTTCTTAAAGATACCCATAAACTAGCCATGATGAGGTTTGATATTCATAATGTTAGTAGCAGTAAAATAATTTGTTTTCTTTATAGAAGAAAAGGAAAGTTTACAAAATGTATCCTTGTGCAGTGTAGCATGGCATTGTAACTTTCCTGAGGTGTGATCTGAAAGGCAGCAGACAGGAAAAAAATATAGACAAATTCGGAACTGGTAAAATTTTTCGATGATATAACGAAATATTTGTAATTTATATGTCAGCAAAGATGCTTTTGGCGCCTAGATGAAGAGTAGAGCCTAACCAGAAGAGTCTAACAGGGCCATGCTACCGATACTACCCAACTAAACTTGACCTTTTGTCGCAGGCAGTGGCAAAGCAGTTAATGAGTAACGCACGACCTCGTGTGGTTATTGCTTTTTTTCTGTCATCACAGTGGTTATTTGACTCCAGATCAATAGGTGTCGCAGTGTAAAAGCCCGATATTTATGTCGAGTGTTCTTGAGTTCGCTTTGCACTCTGGGAGGTTTGTCCTCTTCAGATGTCATTGTAAATTCTACTTTATTTGAAAATTAATATAAAACCAGTATGTCTGGATACACAGCGGATGAAAAACTCCGCTTTGAGCAGTTAGCAAAGCTTCGGCGTCAATGGCTTAAAGATCAGGAGCTCAGCCCTCGAGAGCCAGTCACTGCACCCAAAACACCCGGCCGCATTGAGCGATTCTGGGCTGGATTCCTGGAGCCCAAGACACTCTGGAGACTTTATACATTTAAAGCCTATAATGCCAGTGTTTTTGCCATCACGCGGATTCTGATCCCAGCCTGGGTCGTGCATTACTATATGAAGTACCACGTCGCTGTAAGTGCATACTGACATACTGTTTCTTCAAGTGTGACTTGCTTTCTTTGATTCAATTACCTAAGAATTACCGTGACAATTATAACCTTCGTGTCATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATAAGAATGTACATTATTTTATGAAAAGTTATGAAATTACTTTAAAAATGTGGGTACAACACTCATGTCATGATTCGGTTCAATACTATACTGATCATGATACTTTAAACAAAGTCAAAATAGAGTTGAAGGTTTTTTTATTATTTGTAACACTTTTAAAGCCCTTTGTTGTTAACATTAGTTAATGCATTAACTAACATGAACTAACAATGAGCAGTATATTTTTAAAGCATTTATTAATCTTTGTTAATGTTAGTAAAATGTTATAGTTTTTTTTTTTTTCATGTTCACACAGTGCATCAACAAATGTTTAACAATTACAATTTGATTTTAATAATGTATTGGTAAATGTTAAAATTAACTAAATTTACTTTATTTTAACTCTGTTTACTTCATATTAACTAATGTAGTTAACTAATCTTAATAAATGAAACCTTATTTTAAATTGTTACCAAATTATTAGTTCTAGGGTATATGATAAACAGTTATCAAAAAGTACTGTTAATTAAAATGCTAAATTTGGTATTACATCAGGCGTGGACTTGAATAGGCTTAAACTTGCACTCACCAATGTACAGGGCAACGCTGACACCAGAATAGAAATATTCATCATTCTGCTTGGCTAAAAATACAAAATGATATGCTGACACTCTGTCTCTGACTACAAACATTTAAAGTTATAAATAATGTATTTTTATTAAAAAATATATTGTATATTTACTTTATTATTCATAATTAATAAACATGGAAGCTCAAATGTGCAGAGGTGTTTCCAGAGTTTGATAATCACAGATCAGCATCAGCATCAAAACATTCATATTTATTTATTTGTTTTCTTTACTCATAGAATGTAGAAAACACTATTGTAAGTATGTGCAGCAGATCATTTCATTAGTTCAATATTAAAATGTAAGCTTTTTTTTTTTTTTTTTAGATATCAAAACTGGTTACTGTTTGGGTGATGACATTGACAAACTCCATATTTTTAAGTTTATATTTTATTTGACACTTGACCATACTTCATTTCTATTAAAATTTCTGAA

Function

symbol description
ndufb6 Predicted to be involved in mitochondrial ATP synthesis coupled electron transport. Predicted to act upstream of or within mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of mitochondrial respiratory chain complex I. Is expressed in several structures, including adaxial cell; alar plate midbrain region; optic tectum; optic vesicle; and retina. Orthologous to human NDUFB6 (NADH:ubiquinone oxidoreductase subunit B6).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_10675299_10675754.mRNA True 2156 mRNA 0.33 2 10674589 10676912

Neighbor

gene id symbol gene type direction distance location
CI01000300_10661680_10669987 MXD4.L, MXD4 coding upstream 3183 10661680 ~ 10674265 (+)
CI01000300_10604458_10604787 NA coding upstream 69556 10604458 ~ 10605033 (+)
CI01000300_10496235_10498777 FABP2 coding upstream 175645 10496174 ~ 10498944 (+)
CI01000300_10445111_10492819 GUCY1A3, GUCY1B3 coding upstream 181047 10445111 ~ 10493542 (+)
CI01000300_10401994_10404248 NPY2R coding upstream 269914 10401565 ~ 10404675 (+)
CI01000300_10682604_10685243 TOPORSA, TOPORS coding downstream 4405 10681317 ~ 10685274 (+)
CI01000300_10688627_10696530 MTAP.L, MTAP coding downstream 11715 10688627 ~ 10696530 (+)
CI01000300_10764813_10766212 NA coding downstream 87221 10764133 ~ 10766249 (+)
CI01000300_10854388_10857566 NA coding downstream 177476 10854388 ~ 10857574 (+)
CI01000300_10896258_10905139 NA coding downstream 219346 10896258 ~ 10905260 (+)
G414455 NA non-coding upstream 41009 10632727 ~ 10633580 (+)
G414444 NA non-coding upstream 118170 10555288 ~ 10556419 (+)
G414432 NA non-coding upstream 245445 10428815 ~ 10429144 (+)
G414424 NA non-coding upstream 254809 10419553 ~ 10419780 (+)
G414488 NA non-coding downstream 23872 10700784 ~ 10701961 (+)
G414495 NA non-coding downstream 50328 10727240 ~ 10727441 (+)
G414496 NA non-coding downstream 56704 10733616 ~ 10738720 (+)
G414840 NA non-coding downstream 63825 10740737 ~ 10741038 (+)
G414860 NA non-coding downstream 82680 10759592 ~ 10759872 (+)
G414249 NA other upstream 300691 10369911 ~ 10373898 (+)
G413459 NA other upstream 1725986 8857687 ~ 8948603 (+)
G411777 NA other upstream 4204884 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 1026572 11704476 ~ 11708351 (+)

Expression


Co-expression Network