CI01000300_11036591_11037929 (HEMGN)


Basic Information

Item Value
gene id CI01000300_11036591_11037929
gene name HEMGN
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11034674 ~ 11038107 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_11036591_11037929.mRNA
GCATATAAGCAAACGCAACACAAGGCAGCCAGGACAAAAGGGACTGCAGAGTCTACTGCAACTGCATTTTTCACAACTGTGCTAACTGTTTAGAAAATAATGACTTCATTGCCAGACAAGAACAAACTGTACTGACAAAGAAGAACAGTGGTCAGAGCTCATCTACAGCACTACAGACAGTTCCGCTGCAGGATAGTTGGTAAATAAAAGTACTGAATTATGAGAACCCCTGACCCAGTTTTAAAAAGCAATGCATGTACATGGTGGGAGATTTGTAATTGTAGGGTCAGCCATCTTACTGGTATCATTAAGTCCAATGATTGCTCTGTACAGTTACATGATGGCCAAAAAATAAGAGGCTGTTTTGTACACGGTGCATGTGATGCAAACACTTTTCTCTTATGCTATTCCACTGCTCCAGGGTGACAACCCAAAATAAAATGCAAAACAAGACCATTTTCAGCACAGTGGAGTCAAACGCTTTCCATGGCCTCTCTGACATGGACATCTTTGAACATTTATTTCATCCTACAAAGAACTGGAGGCTTTTCTTCATGAAGAATAATGCAATATCCCACATACAGGCATCAACTGTTCTGAAGGCGTCTTCGTATTAAAATACTGTTTGCTGTTATTTTGTTATTATGTTGGAGGTAACCACATTATAGCAGTGGGAGAGAAGAAAACAAAGTATTTAATTTTAATGACATGCAACAAAGTGCTAGGGGAAAGTAATTTGTTGCAAAAAGTGTAATGAATATATAAATAAACGTTAAATCATTTTAATATAAGATAAATGATGAATGTCTATGATCATTTTTAATTCATTAACCTCAAAGCTGTTCAAGAAGAAGTCATGCGCACAGTATCTAAATGGCGGGACAGCAGACCTCAATATGTTTTGACCTGATTGTGAACACGCCCAGAAAGTGAGCAGCAGAGATAAAATGGTTATGTATGAGTGGCCAAAGGGCTTTTTACTACTTTTTTGAGTTTTCAAATAACATGGAAATACAGAATGGAGAAACGCCTTTAATGTTAGCTTGTTTGTTTTCTCTTTCAAAAGGAATAGTTTATCATGTGGTGTGTCGTTAAACTACAATACCAAAAATTAGATTAAGTGTGTGTGGATTCATTCGTTTATAGACCACAGGCTACCTTTATATAATTTTTTAAATAATTCAATTATTTTAATTTCCCTGTTTTATGAGATCCACGTTTACTGAACAATAAATAAAGGAATAGAAGACATAAATCTGATTATTGACGTGTAGGAGAGCTTTTGGAGAACATTAATAGAATGTGTACAGAAACATTTTCTGACCAGCCAACAGAGAACATTGGGATGTCTATTTGGTGAACGTTCCCAAAACGTTTTGGAAACCAAAAATTGTTAGCTGCAAATGGGATACAGTGTCTGAAGCACTTTAGTGAAGAATCTTGCTCAACTCCTGTGATATAAAGTTACTTATAGCTCTTCACAATCACAAATAAATCTTAAAGATTTGTTTTACTGTACTATGCTTTGTTTAGCTCAATCTACTGTAGACCAATTTAAACTTATATGTAGTAGTTTATATTTTTTTTATTGATCATTCAGCTAGATGTTTGTCTATGACCCTTGACCAAGTCAAGAATAGCGGTCATCTCTCGTGACGACAAGCAAACAGTCACATATACACAGGCAGCCAGCATCATGACCTCCTTTTTTTTTTTTTTTTTACTTTCTTCTGTGAGTATTGTGCCAAGTCCTCCACCTTTGCAAATAAGATAAGAGCACAACTGCAAGAACTCTCCCAGCACTACGGTAATGTTTAACCAGATAATTATTCTCTTAGCGGCAGGAAAAGTAAATGGGCGCAATTTTTTTCAGACCTGTCATTTCAATACTTCATATTCATGTGACAGGACAACAAAATGGAAGAGACGTTGGAGAAAGAGATTCCGCTGTCTGAAGTAAAAGATTCTGACGAAGGTGGAATTCGGCTGCGATTGAGAGACAGAGACCTGTTGAAGAAACGAAAAGCAGAAGCAGAGGAAAAGGCAACCAACCAGGCACAAAGCCTTAAAAGAGTGAAAAAGAAGACCAGCAGTACCCCAGGAAGGAAAGGTCGACCAAGAAAAGAACAGCCCATAGTTATTCCAGAAGATCTTAGTCTGGCTCAGGAAACAGATCCTTCTCCAGTCACACTTCCTATCACAGTACCTGTATTACCCACGACAGCAGAGACAGTGCCTGTTCTACCAGCCGAGCCACAGCCAGAGCTGGTGCCTGTGGAAGCTGTAAGTGAAAAACCTCTTGAGGGGTTTCTGATTGAGGATCTGGGGCCAGATGAGGAGGAAGACATGCCTCAAAAAAGCCTCGTCATTGATACAGGTGATGATGAGCAGCCATGTGCTGATGTGCCTGAACAAAGTCAAGTCTCAACGGCTGCATTTTCTCCACCACCTGATCCTTCTCAATCAGACAGCCTAAACCTACCTGAGAATTTACTTATCTGAGTATCTATTTTTTACAGCAAAAACGCATTGTAACTCATTTAGTATTTTTACTTTATCTCAAAGGATTTCAAAACCTGAAACAAAAAAATTGTATATTTATTCAAATTGTTCATGTTTCTGTGTATATATTCCACTCATCAGTATACTCTTTGCAAAACAGCAACCCAAAACATTGTTA

Function

symbol description
hemgn Acts upstream of or within erythrocyte differentiation. Is expressed in several structures, including brain; erythroblast; hematopoietic system; lateral plate mesoderm; and pleuroperitoneal region. Orthologous to human HEMGN (hemogen).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_11036591_11037929.mRNA True 2680 mRNA 0.38 4 11034674 11038107

Neighbor

gene id symbol gene type direction distance location
CI01000300_11005365_11024863 CORO2A coding upstream 8455 11005365 ~ 11026219 (+)
CI01000300_10969048_10992283 USO1 coding upstream 41448 10969048 ~ 10993226 (+)
CI01000300_10955227_10962261 G3BP2 coding upstream 71538 10955227 ~ 10963136 (+)
CI01000300_10938720_10949086 ARHGEF38 coding upstream 85443 10937714 ~ 10949231 (+)
CI01000300_10896258_10905139 NA coding upstream 129414 10896258 ~ 10905260 (+)
CI01000300_11044621_11061213 NA coding downstream 6461 11044568 ~ 11061265 (+)
CI01000300_11141716_11143148 NA coding downstream 102744 11140851 ~ 11143595 (+)
CI01000300_11303493_11313969 NA coding downstream 265242 11303349 ~ 11314080 (+)
CI01000300_11323703_11358998 NA coding downstream 284346 11322453 ~ 11359248 (+)
CI01000300_11370829_11375624 NA coding downstream 332722 11370829 ~ 11375773 (+)
G414904 NA non-coding upstream 2163 11030013 ~ 11032511 (+)
G414936 NA non-coding upstream 115347 10919049 ~ 10919327 (+)
G414930 NA non-coding upstream 173461 10860939 ~ 10861213 (+)
G414885 NA non-coding upstream 230518 10803901 ~ 10804156 (+)
G414883 NA non-coding upstream 234724 10799716 ~ 10799950 (+)
G414946 NA non-coding downstream 35530 11073637 ~ 11073866 (+)
G414948 NA non-coding downstream 37230 11075337 ~ 11075544 (+)
G414949 NA non-coding downstream 39812 11077919 ~ 11078522 (+)
G414909 NA non-coding downstream 40993 11079100 ~ 11149127 (+)
G415028 NA non-coding downstream 162108 11200215 ~ 11287017 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other upstream 371187 10661680 ~ 10674265 (+)
CI01000300_10604458_10604787 NA other upstream 429912 10604458 ~ 10605033 (+)
G414249 NA other upstream 660776 10369911 ~ 10373898 (+)
G413459 NA other upstream 2086071 8857687 ~ 8948603 (+)
G411777 NA other upstream 4564969 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 665377 11704476 ~ 11708351 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location