CI01000300_11141716_11143148


Basic Information

Item Value
gene id CI01000300_11141716_11143148
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11140851 ~ 11143595 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_11141716_11143148.mRNA
GTACAAAAACGAACTGGCTAAAAACAAATGATCCCACCATAAAGGATCCATCTGAGCAATCACAAAAAAGAGAGACGAGCAAGATGATGTGACCAGAATGAACATTTTTGGAGTTTTATGTTGATTGTTTTTTAGCATTGATCGTGTGAACTGAAGTTTGCTGGGGCTACATATACATAGTGGTGTGCATTTACGCTGACATGCCAATGTGTCTAAAATATGTGCAAATCAGGTCAAAACATCAAGTACACAATAATTTACACAACTAAAACACTAGCTCAAATAAAGAAACAGTAATCTCCCCAAAATTTGGTTCTCAGTGGTTTCTGCAATCTATAAATTTCAAATAGCAAACCAAAATATGGTTTTGGTTTACAACTCCCGTATCATCTTTTCTGCCAACAAATCAATGTTATTCCGAGGCGAATCATAAAAAGCACTTCATATTGCATCATTTATCTGAAAGTTTGTTGTGTGAGGCAAAGGGCTACAAGAGGGTAAGAGCAGAAAACGGGTAGAGTACTGCGTAGACAAGGGGCCTCCACTGCCATGCAGGGCACACTCCATCTTACAGAAGTACCACAGTCTCTTGCTCCCTTTCCCTTTTTTTTTTTCCTCTGGTCAGGCGTTTTTGCTGACTGCAGCTGTAAGTGCAGCCAGTTCCTCTGTCAGCACTTTGCCCTCCTTCATCTTCACCAGCATGGCGTCCATCAGCAGGCCTGCAGAGGGGATCTAGGGAGAGAGAGAGGGGGAAAGAAAAGAAAACCTGTCAAAAAGAAAAGAGAGGCTTTTTTCCTGTGCGTTTTTTTGACACCAGACAGCTTCTCCGGGGTGTCTTCTGCTTTGATGACGACTCTAACCTGTGATGAAACTCAAGTTCTTCACTCTGATTAATTATGACAAGGAACAAATTCAAGGAACAGGTCACGGAGGCTTTTCTTCAATCTCCAGAAGAGGATATTTTGTGGAAAACACATTTCCTCACAAAGTAAATGGGATTGTTTTGAGGTTTGATTTGCTGCCATGCCACTCACGGCCTGCCACTGCTCCTGGCGTTGCAAGGATCGAGAAAAGGGATGATAAATGCGCAGCGTATGCGCTAAAGCCAAGCGCGGAGGCTGCGCTAACCTATACTCCGACTTCGCTTTCTTCTTCCACCCAAAACCTTCTCAAGGACTCTGTGGCCCACAGGGACGGCAGACTCTGTCATTATCATGTAACAGCTGCTTTAGCAGGTAATCTCCTCCCTTTGGACAGCCCTGCCTTAAGAGTAGCTTTTGTGGGGCCAGTCTGCGCGCAAACCAAAAGTAGATTCGCGTACGATCAGCAAAATGTTTTGGGAAATGTACGCAAAGTGGCGCTGCAGGTTGAGACAGATATCTATGAAGCACCATTGCTTCCGGCATCTCCTCCTCAGGTGCAGAAGAAGTATTATAATCTGTTGGCAAACAACTCTTCCGACGCCACTTCAATGCATTTTGTCGAATTCTCCCCCATCTAGACCACCATGGAGTGTGGGTGAAAAATTGCATTCTATGATCCTATAAAGCTTTCTGATCTTTGATCTTCACAAAATTAATTTTAAATCAACATTATTGAACATGGGAATAAAAAAATAAAAAATAAAAACAACAACCAAAACACCCAAGACCTACTAAAGTCTGCATTTGATTAGAAGATAATGAATGTGTCACATGTGGGAAAACAAGAGATCAGGTAAGAAAATCAAGCGTAGCGCCAATCTATTCTTCTGTGCCAGTAATTACCCACCCTGCAATGCCTCTCTTCTCCATTCTCCTTTTCAGGCCACTGGAGACCAATATGAAAGGGAATTGGACACTTGGGGCCACAGATACTTGTAATTAAAACTCCTTTTTTAAATGTTGTTTCTTACATCGTCAGGTCTATACAACCTGAGCCGGTAGATCTGACCTAAATACACAGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_11141716_11143148.mRNA True 1948 mRNA 0.43 3 11140851 11143595

Neighbor

gene id symbol gene type direction distance location
CI01000300_11044621_11061213 NA coding upstream 79586 11044568 ~ 11061265 (+)
CI01000300_11036591_11037929 HEMGN coding upstream 102744 11034674 ~ 11038107 (+)
CI01000300_11005365_11024863 CORO2A coding upstream 114632 11005365 ~ 11026219 (+)
CI01000300_10969048_10992283 USO1 coding upstream 147625 10969048 ~ 10993226 (+)
CI01000300_10955227_10962261 G3BP2 coding upstream 177715 10955227 ~ 10963136 (+)
CI01000300_11303493_11313969 NA coding downstream 159754 11303349 ~ 11314080 (+)
CI01000300_11323703_11358998 NA coding downstream 178858 11322453 ~ 11359248 (+)
CI01000300_11370829_11375624 NA coding downstream 227234 11370829 ~ 11375773 (+)
CI01000300_11444117_11455995 BNC2 coding downstream 300522 11444117 ~ 11456338 (+)
CI01000300_11478840_11479838 NA coding downstream 335188 11478783 ~ 11480053 (+)
G414949 NA non-coding upstream 62329 11077919 ~ 11078522 (+)
G414948 NA non-coding upstream 65307 11075337 ~ 11075544 (+)
G414946 NA non-coding upstream 66985 11073637 ~ 11073866 (+)
G414904 NA non-coding upstream 108340 11030013 ~ 11032511 (+)
G414936 NA non-coding upstream 221524 10919049 ~ 10919327 (+)
G415028 NA non-coding downstream 56620 11200215 ~ 11287017 (+)
G415078 NA non-coding downstream 146813 11290408 ~ 11290643 (+)
G415080 NA non-coding downstream 326216 11469811 ~ 11473607 (+)
G415103 NA non-coding downstream 397359 11540954 ~ 11541281 (+)
G415108 NA non-coding downstream 408667 11552262 ~ 11552599 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other upstream 477364 10661680 ~ 10674265 (+)
CI01000300_10604458_10604787 NA other upstream 536089 10604458 ~ 10605033 (+)
G414249 NA other upstream 766953 10369911 ~ 10373898 (+)
G413459 NA other upstream 2192248 8857687 ~ 8948603 (+)
G411777 NA other upstream 4671146 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 559889 11704476 ~ 11708351 (+)

Expression


Co-expression Network