CI01000300_11303493_11313969


Basic Information

Item Value
gene id CI01000300_11303493_11313969
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11303349 ~ 11314080 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_11303493_11313969.mRNA
GTATAAAAGTAAGAGTAATGTAAGGAAAAAAATGCCATTAAGGACAAAAGCTTAGGCCGCGCCACAGGGGCCTATAGTGCACTACCCCACCTCCTCAAAAAAACATTTTTCTAAAGGCCATGATGACTATAATGTTATATTAAAATGTTAATGTTGAAAAATTTGGGATGCACTAGGCTACCTGTTTCTACCAACCTCCTCGCTGGTGCTTGGTTGGGACATTTCGCTCGAGTTCTCTTCTTGAGTCTCTGCCACGGACATCTTCGTACTTGGCTACGTACGTCTGCTATGTCCAGTGTTGGGGGTAACAAGTTACAAATTTGCTGTGATGCTGTCAAGCTTGTGGACCAGGTTTTCTTCACTCAAAGAGCATTATTGTTGGACAGATGCACCTCAAACATAACCATTTGGCCATCTGAGGTGTTCATATTTCAGTTTGCTCCCAGGAGCTCGCAGGGTGAACCGAGAGGCCATCCAGTCATTCGTTGTCCATCAGATGTGTTTACTCTTTCCGTGACAGCCAACACATCTGGAGCGCATATTCAGGTTATTCCAGTGCCACTAGACACATTCCATGAGATCATTTCAGAGGTTGTTATGGCGATCTTCTCCCCCCAGTTGTATGACAGAAATTGCTGGAAGAGGATGGATATCTCTGACTCTGAGGCGCGACTTTGGAAACTCTTGGCAGGTCTAGCAGGGGAAGTCCCCTGGACGACGGATGAGGCAGCGTCTTTGGGTCCTTTTCAAAGGCCGGAGTTTGGAAAGGGAGAGGACATGATGAAGAGATCAGGAAATGCTCCATTTGCATTCCTCAGAACTCTGATGTGATTTCTCATGTGGAAGTTTAACAAATTAACAGGGAGAATGAGATAGGCCTACTACAGGAGATTTATATTTGTTCTTAAAAGTGGTGTTAGTAGGCAATTTTTATAATGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_11303493_11313969.mRNA True 942 mRNA 0.44 6 11303349 11314080

Neighbor

gene id symbol gene type direction distance location
CI01000300_11141716_11143148 NA coding upstream 159754 11140851 ~ 11143595 (+)
CI01000300_11044621_11061213 NA coding upstream 242084 11044568 ~ 11061265 (+)
CI01000300_11036591_11037929 HEMGN coding upstream 265242 11034674 ~ 11038107 (+)
CI01000300_11005365_11024863 CORO2A coding upstream 277130 11005365 ~ 11026219 (+)
CI01000300_10969048_10992283 USO1 coding upstream 310123 10969048 ~ 10993226 (+)
CI01000300_11323703_11358998 NA coding downstream 8373 11322453 ~ 11359248 (+)
CI01000300_11370829_11375624 NA coding downstream 56749 11370829 ~ 11375773 (+)
CI01000300_11444117_11455995 BNC2 coding downstream 130037 11444117 ~ 11456338 (+)
CI01000300_11478840_11479838 NA coding downstream 164703 11478783 ~ 11480053 (+)
CI01000300_11500083_11519381 NA coding downstream 184743 11498823 ~ 11520162 (+)
G415078 NA non-coding upstream 12706 11290408 ~ 11290643 (+)
G415028 NA non-coding upstream 16332 11200215 ~ 11287017 (+)
G414909 NA non-coding upstream 154222 11079100 ~ 11149127 (+)
G414949 NA non-coding upstream 224827 11077919 ~ 11078522 (+)
G414948 NA non-coding upstream 227805 11075337 ~ 11075544 (+)
G415080 NA non-coding downstream 155731 11469811 ~ 11473607 (+)
G415103 NA non-coding downstream 226874 11540954 ~ 11541281 (+)
G415108 NA non-coding downstream 238182 11552262 ~ 11552599 (+)
G415161 NA non-coding downstream 340983 11655063 ~ 11714698 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other upstream 639862 10661680 ~ 10674265 (+)
CI01000300_10604458_10604787 NA other upstream 698587 10604458 ~ 10605033 (+)
G414249 NA other upstream 929451 10369911 ~ 10373898 (+)
G413459 NA other upstream 2354746 8857687 ~ 8948603 (+)
G411777 NA other upstream 4833644 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 389404 11704476 ~ 11708351 (+)

Expression


Co-expression Network