CI01000300_11323703_11358998


Basic Information

Item Value
gene id CI01000300_11323703_11358998
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 11322453 ~ 11359248 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_11323703_11358998.mRNA
ATATATAATGACTTGTATACACCTCTTGGGGGCATAAATTCTGAAAATATGATACAATTGATGTCATACAAGTGATATCATAATGAAGAAAATAAAGTTCTCATTAAAAGCATGAAACGGTTGAAAAGAATTTGACAATGTTTTATTATTATTTCTTAGAAAAAAATATAAAAACTGCTGCACTACACTAAGAACACACACACGTGCACACACACACACCCCCACACACACACACACACACACACACACACACACGCGCGTTTGTTTCACTATATTAATGAGGACATTGTATAGACTTCCATTGATTACCTACCCCTACCGCTAAACTCAAACACTCACAGAAACGTGCAAAACACTAGATTTAAATAAAAACATTTTGGCTGATTTATAAGCCTTTTTAACTAGTGAGGACTAGTAAAATATCCTCACCAGTCAGTTGTCATGATATTATACTGTATATGTCAAAGATTATGACAACTAACTAGTGAGGACATTTTACTGGTTAAGATGTGTATGTATTCAAGGTGTATGTAAAGCATGTTACTACTTTTTACTTTATAGGATACTTTTTACATAACGATTTCAGAAGTTTTTCAAAACCATATGAAAAAATACATAAAGCACATTTCTAAGAACTTGCTACATGTTTTAAGCTGGACTTTTTATTTTGTAGAGTGGAAAGTATTATATGTCATTGACCAGTTGATTAGCAGTCAGTTGTTGATGCAAGTGTTTTTTAGTTATTTATTTATTTTTTTATCTGGAGATTCCCAGTTTTTATGGCACCAGGTGGCATTGTGAGAGGTCCGGTCAGGCCTGGTCTTATGACAGCGAACATAGATTGTGTAGCCGAACGGTAACTTCAGCTGAAGGCCAGCCCAATTATCCCCAATCAGACTCTTAACTGCTGCGGTCTGGGGGTGGGGTGCAAAGCTCCCTGAAGGGCTTAGCCTTCATTACAGGGCAGCACATCCTGCACATTAACTTTCTATCCCCCCTCCTTCTGCTCACTCTCCTCTGTTTCTACTCTCATGCCCCCTTGGCTTCCTTGTGTGGTGTGCAATGATACGGTGAACAATCAGACAGACAAACCTAAAGCACATGGAGAAGGCCACTGAGCTAGGCAAATTCTAGTCTTTCTAATAACGCACAAAGAAAACCAGGCGAAATTCTTGACTGCAGTATGAAGTCACATGGGCCAAAGGTAGGAGGACAAGGAAGCGTGTGCGTCTACGCTTACAGATGATGGGATGTGTCCCCCTACCTCCCCTCTCAAGAGACAGAAGAGACAGATTGGAGCAGAAATCAGCTCAGGAGGGCATCAAACGTTTGCTGCTGTCTTCAGTCACCAGCTGATTGGTTGTGGGCCTCTGTGGGCTAGTAGCAGATCTGAGCAGAAACCTTCCTTGCACACAATGCACAAAACGCACTCGGTAACTTATCAGCAGTGGCACAGCAAGAACAGAGAGAATCTCAGTATGACTAAGGCTAGATTAGAAGAGTTCAGCGTGTCTCTGGAGTGGGGGATGATGAGAAGTATTGGTGGGAGTCTGAGTAGGGATGTGATGAAAGCATCCCACGTGTTGGAGCACAGGGTAGGGCCACAGCGCACAGCTCTCTCTGGAGGTATGGAAGCAATTACTGGCACTGAGGGCCCACAGACACCCACTGAGAGAAGTGGTCCCAGAAAAGAATGCACACAGTTCTCTGGAAGGCTAAATTACTTTCGTATGAGGACTAAGAGGGTAAGAGAGCCACTCAACCGGCTACTCTACACACATACACACTCATCACAGCTTTTTAAAATGCCGGAGCAAAGCAAGAAGGTCTTACAGCGCTGTGGGATGAAAAACAGGGTGGCGGGTGCATTCAAGAGGCTAACAGTTTTAATGGGTGGCAGGCAGGAGAAGAGTAAAGAGTGGCTGAATTATTCAGTCATGTCTCTGGTGAAAGGGACTGTGGTCTCTTCTACAGCTCTGCAAGTCCTGTTTCCAGAACAAGAGAGAATAAGGAGACAAAAGGAGGGAGGGAAGGAAAACCCCTGTGTGTACCATGAAGTGGACTGGTCCATGTGTCAAAGAGGAGTAATTGATGACAGGCGTGTGAGTGAGTAAACCTAATCAGGAGCTCCAGGGACATGCACCAGTGATTCTTATATGCAGAATAGGAAAGCTTCACAATTTGTGACTATCTCTTTCTGACTATCTGTCTGTGGTTGCTTCCTTTTCTAAGTTTCAAGAGTGGAGGCTCCTATTTGTATGTTGTGTCATGGTATTTTGAGAAAGAAAGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATTATTTGTTATTATTTCTTAAGTGAAGGTACAAAGCCTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_11323703_11358998.mRNA True 2364 mRNA 0.42 5 11322453 11359248

Neighbor

gene id symbol gene type direction distance location
CI01000300_11303493_11313969 NA coding upstream 8373 11303349 ~ 11314080 (+)
CI01000300_11141716_11143148 NA coding upstream 178858 11140851 ~ 11143595 (+)
CI01000300_11044621_11061213 NA coding upstream 261188 11044568 ~ 11061265 (+)
CI01000300_11036591_11037929 HEMGN coding upstream 284346 11034674 ~ 11038107 (+)
CI01000300_11005365_11024863 CORO2A coding upstream 296234 11005365 ~ 11026219 (+)
CI01000300_11370829_11375624 NA coding downstream 11581 11370829 ~ 11375773 (+)
CI01000300_11444117_11455995 BNC2 coding downstream 84869 11444117 ~ 11456338 (+)
CI01000300_11478840_11479838 NA coding downstream 119535 11478783 ~ 11480053 (+)
CI01000300_11500083_11519381 NA coding downstream 139575 11498823 ~ 11520162 (+)
CI01000300_11553769_11566330 NA coding downstream 193501 11552749 ~ 11566666 (+)
G415078 NA non-coding upstream 31810 11290408 ~ 11290643 (+)
G415028 NA non-coding upstream 35436 11200215 ~ 11287017 (+)
G414909 NA non-coding upstream 173326 11079100 ~ 11149127 (+)
G414949 NA non-coding upstream 243931 11077919 ~ 11078522 (+)
G414948 NA non-coding upstream 246909 11075337 ~ 11075544 (+)
G415080 NA non-coding downstream 110563 11469811 ~ 11473607 (+)
G415103 NA non-coding downstream 181706 11540954 ~ 11541281 (+)
G415108 NA non-coding downstream 193014 11552262 ~ 11552599 (+)
G415161 NA non-coding downstream 295815 11655063 ~ 11714698 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other upstream 658966 10661680 ~ 10674265 (+)
CI01000300_10604458_10604787 NA other upstream 717691 10604458 ~ 10605033 (+)
G414249 NA other upstream 948555 10369911 ~ 10373898 (+)
G413459 NA other upstream 2373850 8857687 ~ 8948603 (+)
G411777 NA other upstream 4852748 6469245 ~ 6469705 (+)
CI01000300_11704476_11708232 NA other downstream 344236 11704476 ~ 11708351 (+)

Expression


Co-expression Network