G408104


Basic Information

Item Value
gene id G408104
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 146998 ~ 147235 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU468918
CGGAGGTCTGTGCAAGCCACTGTTCTTATTGACAGTCTTCATGCAATGCATTAAAATGTTGTCGTATTTTCGTATTTACATTCGTATTAAGCAATGCTTTGACCGTTCTCTGTAGATCCAGCCTTCTCGCAAGCCACGATTGGTCGATTATGTATAATGCACGCTATTGGTCAAATTATTTTTCAGTCATTACCTTCCGCAAATATGAAAACAAAACCAAAACTGGGACATTTTATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU468918 True 238 lncRNA 0.39 1 146998 147235

Neighbor

gene id symbol gene type direction distance location
CI01000300_00103395_00123529 SLC5A10 coding upstream 23469 103395 ~ 123529 (+)
CI01000300_00003224_00007587 NA coding upstream 138964 3224 ~ 8034 (+)
CI01000300_00150486_00160308 NA coding downstream 3251 150486 ~ 160515 (+)
CI01000300_00180177_00181561 NA coding downstream 32885 180120 ~ 181617 (+)
CI01000300_00226653_00303160 NA coding downstream 79418 226653 ~ 303160 (+)
CI01000300_00313257_00313598 NA coding downstream 166022 313257 ~ 313641 (+)
CI01000300_00324861_00371897 NA coding downstream 177331 324566 ~ 372421 (+)
G408066 NA non-coding upstream 115732 29140 ~ 31266 (+)
G408059 NA non-coding upstream 128710 17958 ~ 18288 (+)
G408058 NA non-coding upstream 130073 16689 ~ 16925 (+)
G408056 NA non-coding upstream 131829 14895 ~ 15169 (+)
G408052 NA non-coding upstream 134290 12474 ~ 12708 (+)
G408149 NA non-coding downstream 82164 229399 ~ 229789 (+)
G408162 NA non-coding downstream 131565 278800 ~ 279317 (+)
G408163 NA non-coding downstream 141419 288654 ~ 288963 (+)
G408166 NA non-coding downstream 147315 294550 ~ 294974 (+)
G408171 NA non-coding downstream 173374 320609 ~ 320843 (+)
G408510 NA other downstream 829365 976600 ~ 977099 (+)
G408498 NA other downstream 869832 1017067 ~ 1020734 (+)
G408910 NA other downstream 1485795 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 1602665 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 2166174 2312515 ~ 2321088 (+)

Expression


Co-expression Network