G408162


Basic Information

Item Value
gene id G408162
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 278800 ~ 279317 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469004
GATTTTCTCAGTTTTTTGTTCAATTAGTCAGCAATTACCCTCTCACATCTACAGGTAATGGATAGGTGCGTAGGACAAAGGACCAAAAAAGTCCAAAATCAAAAGAAAATCCCGCACACTATCAAAGCTTACAAAAGTATCAACATTTCTTTATTTATTGCAACATTTCGGTCCCATGTCATGAAAATTCAAAGAAAAAGAAATTTTTTCAAAGAAATTGATACTTTCTCGGCTCGGGGTGTGTAATGTTTGGAGAGGATGGATAACCTCCATTTTTGTTCAAAATGTTGCTTTTTTATGAAACTTACCCACATTCAAGTGTTATGATTAAAAAAAAAGAATGCATGAAGCTAGAATAAAACCTTTTTTCCATTTAAAAGCAGAGGCTCTGTTCTTTCTTTTGATATATTGCATGTTCAGATATTAATACAACAAAATATTCTGGGGGCCATACAATTTTTGTGAAAATGATCAAAAACGCTGGCGGTGGCTGGGAACTTTTTTAAAAAACACTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469004 True 518 lncRNA 0.33 1 278800 279317

Neighbor

gene id symbol gene type direction distance location
CI01000300_00180177_00181561 NA coding upstream 97183 180120 ~ 181617 (+)
CI01000300_00150486_00160308 NA coding upstream 118285 150486 ~ 160515 (+)
CI01000300_00103395_00123529 SLC5A10 coding upstream 155271 103395 ~ 123529 (+)
CI01000300_00003224_00007587 NA coding upstream 270766 3224 ~ 8034 (+)
CI01000300_00313257_00313598 NA coding downstream 33940 313257 ~ 313641 (+)
CI01000300_00324861_00371897 NA coding downstream 45249 324566 ~ 372421 (+)
CI01000300_00373895_00378177 ALKBH5 coding downstream 94578 373895 ~ 378403 (+)
CI01000300_00380880_00388140 MIEF2 coding downstream 101563 380880 ~ 388565 (+)
CI01000300_00390712_00395191 NA coding downstream 111294 390611 ~ 395743 (+)
G408149 NA non-coding upstream 49011 229399 ~ 229789 (+)
G408104 NA non-coding upstream 131565 146998 ~ 147235 (+)
G408066 NA non-coding upstream 247534 29140 ~ 31266 (+)
G408059 NA non-coding upstream 260512 17958 ~ 18288 (+)
G408058 NA non-coding upstream 261875 16689 ~ 16925 (+)
G408163 NA non-coding downstream 9337 288654 ~ 288963 (+)
G408166 NA non-coding downstream 15233 294550 ~ 294974 (+)
G408171 NA non-coding downstream 41292 320609 ~ 320843 (+)
G408172 NA non-coding downstream 41560 320877 ~ 321076 (+)
G408197 NA non-coding downstream 93583 372900 ~ 373116 (+)
G408510 NA other downstream 697283 976600 ~ 977099 (+)
G408498 NA other downstream 737750 1017067 ~ 1020734 (+)
G408910 NA other downstream 1353713 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 1470583 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 2034092 2312515 ~ 2321088 (+)

Expression


Co-expression Network