G408172


Basic Information

Item Value
gene id G408172
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 320877 ~ 321076 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469014
CAAAAGTAATCTAAATGTAATCCAAAAGTAGTCAGATTACGTTACCAAAAATGTGTAATCTAAGAGATTATATTACTGATTACAAATTTTGTCATGTGATTTGTAATCAGTAACTGATTACAATTCATAAGTAATCTACCCAGCTCTGGTGACAGCAAAGTATAGTTAACCAGTAACGTTACTTCACAATGCGCTTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469014 True 200 lncRNA 0.31 1 320877 321076

Neighbor

gene id symbol gene type direction distance location
CI01000300_00313257_00313598 NA coding upstream 7236 313257 ~ 313641 (+)
CI01000300_00226653_00303160 NA coding upstream 17717 226653 ~ 303160 (+)
CI01000300_00180177_00181561 NA coding upstream 139260 180120 ~ 181617 (+)
CI01000300_00150486_00160308 NA coding upstream 160362 150486 ~ 160515 (+)
CI01000300_00103395_00123529 SLC5A10 coding upstream 197348 103395 ~ 123529 (+)
CI01000300_00324861_00371897 NA coding downstream 3490 324566 ~ 372421 (+)
CI01000300_00373895_00378177 ALKBH5 coding downstream 52819 373895 ~ 378403 (+)
CI01000300_00380880_00388140 MIEF2 coding downstream 59804 380880 ~ 388565 (+)
CI01000300_00390712_00395191 NA coding downstream 69535 390611 ~ 395743 (+)
CI01000300_00422911_00432735 NA coding downstream 101515 422591 ~ 432772 (+)
G408171 NA non-coding upstream 34 320609 ~ 320843 (+)
G408166 NA non-coding upstream 25903 294550 ~ 294974 (+)
G408163 NA non-coding upstream 31914 288654 ~ 288963 (+)
G408162 NA non-coding upstream 41560 278800 ~ 279317 (+)
G408149 NA non-coding upstream 91088 229399 ~ 229789 (+)
G408197 NA non-coding downstream 51824 372900 ~ 373116 (+)
G408141 NA non-coding downstream 120376 441452 ~ 478136 (+)
G408216 NA non-coding downstream 129462 450538 ~ 461022 (+)
G408235 NA non-coding downstream 222173 543249 ~ 543488 (+)
G408238 NA non-coding downstream 229404 550480 ~ 550839 (+)
G408510 NA other downstream 655524 976600 ~ 977099 (+)
G408498 NA other downstream 695991 1017067 ~ 1020734 (+)
G408910 NA other downstream 1311954 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 1428824 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1992333 2312515 ~ 2321088 (+)

Expression


Co-expression Network