G408518


Basic Information

Item Value
gene id G408518
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 951321 ~ 951581 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469430
GTAACTTATGCCGCGTTCCAAGGAACCCGTAACCCGTGTTTTTCCAACCTTCTACCCGTGAAAGTGCACTGGCACTTCCCACCCGTGAACTCGTACTAGATCGATGTACTCCCAGTTCCGCGCTCTGACGTCACATAGCCCGCGAAACAACAATGGCAGCCCCTACGGATGCGGTGTTTACGCAAGTGCACGGTAAAATAACGTAAAATAAAAGGTATAACAGCTTCTCTTGCCTTATGCGCCGTTTTTCCTCCTCCGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469430 True 261 lncRNA 0.50 1 951321 951581

Neighbor

gene id symbol gene type direction distance location
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 82550 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 124886 806846 ~ 826435 (+)
CI01000300_00781242_00787814 PLK1 coding upstream 163170 780675 ~ 788151 (+)
CI01000300_00776177_00776812 NA coding upstream 174383 776017 ~ 776938 (+)
CI01000300_00740073_00744573 NA coding upstream 204914 739096 ~ 746407 (+)
CI01000300_01115718_01128729 NA coding downstream 163217 1114798 ~ 1128760 (+)
CI01000300_01128973_01131417 ELFN1B coding downstream 177231 1128812 ~ 1131441 (+)
CI01000300_01225430_01228695 PMM2 coding downstream 273849 1225430 ~ 1228987 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 290026 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 321094 1272675 ~ 1273753 (+)
G408459 NA non-coding upstream 100182 848237 ~ 851139 (+)
G408437 NA non-coding upstream 247553 698185 ~ 703768 (+)
G408420 NA non-coding upstream 269687 681413 ~ 681634 (+)
G408418 NA non-coding upstream 280979 670104 ~ 670342 (+)
G408414 NA non-coding upstream 284588 666506 ~ 666733 (+)
G408520 NA non-coding downstream 27066 978647 ~ 978992 (+)
G408499 NA non-coding downstream 27830 979411 ~ 980408 (+)
G408501 NA non-coding downstream 35613 987194 ~ 987647 (+)
G408495 NA non-coding downstream 40697 992278 ~ 992829 (+)
G408521 NA non-coding downstream 43509 995090 ~ 995498 (+)
G408510 NA other downstream 25019 976600 ~ 977099 (+)
G408498 NA other downstream 65486 1017067 ~ 1020734 (+)
G408910 NA other downstream 681449 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 798319 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1361828 2312515 ~ 2321088 (+)

Expression


Co-expression Network