G408501


Basic Information

Item Value
gene id G408501
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 987194 ~ 987647 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469413
TAAAATTCATTGCTTTAATTATTTGTTGTGTGACCTCCACTTTTGAATATAGAAATATTTGACAAGTCCATTTCCTCACATTTCCTAAGGTCTTACCACTAGGTTTAGGCCCATTTTTCATCGGACTAGGTGAGGGCGCTTTGGGGGAGCTGATGCTAATGGTGATGCTGGTGGTAGATGGAGCAGGAATGGATGTTGTGGTGATTCCCAGACTTGATGTCCGTGGAGAAGAAGCTGCTTCCGGCCTCTTGGAGGGTGAGCCGGTGCTTTCTATAGAACTGGCAGATCTCTGACGGGTGAAAGTTTGGGAGGGTAAGGGCAGGAATTTAAAGGGGGTAGTTACAGGTGAAAGATCTTCATGGGGTAAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469413 True 370 lncRNA 0.46 2 987194 987647

Neighbor

gene id symbol gene type direction distance location
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 118423 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 160759 806846 ~ 826435 (+)
CI01000300_00781242_00787814 PLK1 coding upstream 199043 780675 ~ 788151 (+)
CI01000300_00776177_00776812 NA coding upstream 210256 776017 ~ 776938 (+)
CI01000300_00740073_00744573 NA coding upstream 240787 739096 ~ 746407 (+)
CI01000300_01115718_01128729 NA coding downstream 127151 1114798 ~ 1128760 (+)
CI01000300_01128973_01131417 ELFN1B coding downstream 141165 1128812 ~ 1131441 (+)
CI01000300_01225430_01228695 PMM2 coding downstream 237783 1225430 ~ 1228987 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 253960 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 285028 1272675 ~ 1273753 (+)
G408499 NA non-coding upstream 6786 979411 ~ 980408 (+)
G408520 NA non-coding upstream 8202 978647 ~ 978992 (+)
G408518 NA non-coding upstream 35613 951321 ~ 951581 (+)
G408459 NA non-coding upstream 136055 848237 ~ 851139 (+)
G408437 NA non-coding upstream 283426 698185 ~ 703768 (+)
G408495 NA non-coding downstream 4631 992278 ~ 992829 (+)
G408521 NA non-coding downstream 7443 995090 ~ 995498 (+)
G408522 NA non-coding downstream 7933 995580 ~ 995973 (+)
G408496 NA non-coding downstream 11456 999103 ~ 999385 (+)
G408494 NA non-coding downstream 18031 1005678 ~ 1006915 (+)
G408510 NA other upstream 10095 976600 ~ 977099 (+)
G408498 NA other downstream 29420 1017067 ~ 1020734 (+)
G408910 NA other downstream 645383 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 762253 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1325762 2312515 ~ 2321088 (+)
G409984 NA other downstream 2284038 3271685 ~ 3272398 (+)

Expression


Co-expression Network