G408521


Basic Information

Item Value
gene id G408521
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 995090 ~ 995498 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469433
GGGGTAAGAATTACACAAGAGGGATTTAGCTCTCACCATTAAGGGTGTTTCAGTGTGTGTGCATGTACAATATCGCTGAAACATCTCTGTGGCAGAACAATTGGAGGATTTCCTTTTGGAAGCCTTTTTAAATTAAATATGCTCCTTTTATAAAGTGCTAGACCTGCAAAAATCATTCCAAATTTTAAGATGTTTGATATCTGCAGGCTGCAAAAGGGAAAGAACACAACTGATACAGTCTGTTGATGAATATTAACTTATAGAACAGACAAGGGGAACTAGACAATAATATTACATTTAAAACCCGGAACACACCAAGCCGACGGTGGCCGTCAGGCAGTTTTTGTTCATCGGCCAACTAAGTTTTCTAAGTGTGTTCCGCACTGTCGGCTGAAGTTGGTCCTCGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469433 True 409 lncRNA 0.41 1 995090 995498

Neighbor

gene id symbol gene type direction distance location
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 126319 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 168655 806846 ~ 826435 (+)
CI01000300_00781242_00787814 PLK1 coding upstream 206939 780675 ~ 788151 (+)
CI01000300_00776177_00776812 NA coding upstream 218152 776017 ~ 776938 (+)
CI01000300_00740073_00744573 NA coding upstream 248683 739096 ~ 746407 (+)
CI01000300_01115718_01128729 NA coding downstream 119300 1114798 ~ 1128760 (+)
CI01000300_01128973_01131417 ELFN1B coding downstream 133314 1128812 ~ 1131441 (+)
CI01000300_01225430_01228695 PMM2 coding downstream 229932 1225430 ~ 1228987 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 246109 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 277177 1272675 ~ 1273753 (+)
G408495 NA non-coding upstream 2261 992278 ~ 992829 (+)
G408501 NA non-coding upstream 7443 987194 ~ 987647 (+)
G408499 NA non-coding upstream 14682 979411 ~ 980408 (+)
G408520 NA non-coding upstream 16098 978647 ~ 978992 (+)
G408518 NA non-coding upstream 43509 951321 ~ 951581 (+)
G408522 NA non-coding downstream 82 995580 ~ 995973 (+)
G408496 NA non-coding downstream 3605 999103 ~ 999385 (+)
G408494 NA non-coding downstream 10180 1005678 ~ 1006915 (+)
G408509 NA non-coding downstream 60318 1055816 ~ 1066158 (+)
G408502 NA non-coding downstream 138673 1134171 ~ 1134489 (+)
G408510 NA other upstream 17991 976600 ~ 977099 (+)
G408498 NA other downstream 21569 1017067 ~ 1020734 (+)
G408910 NA other downstream 637532 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 754402 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1317911 2312515 ~ 2321088 (+)
G409984 NA other downstream 2276187 3271685 ~ 3272398 (+)

Expression


Co-expression Network