G408496


Basic Information

Item Value
gene id G408496
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 999103 ~ 999385 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469407
TGTGTTTGTGAATTAGAGCGCAGAACGCCAAACCGTCCCGGAAAGATGTGGTCATGTTGGTGATCGACACGTCCCGGTATCCCTCACACTGGATTTTACACCACTGTTGAAGCGCCTTCACAGCAGCCATGGTGCGAATGCGATTCAACCCGGGACTAGTACTTTAAACTGAACACGGTATCTGGAGTTGCCTCCTTCAAATGGGATCTCGAACGCTGAATGTTGAACGCTTTTGGTTTTTCACTCACCCACACGAAGTGATTTCACCCTCAGCTGAAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469407 True 283 lncRNA 0.49 1 999103 999385

Neighbor

gene id symbol gene type direction distance location
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 130332 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 172668 806846 ~ 826435 (+)
CI01000300_00781242_00787814 PLK1 coding upstream 210952 780675 ~ 788151 (+)
CI01000300_00776177_00776812 NA coding upstream 222165 776017 ~ 776938 (+)
CI01000300_00740073_00744573 NA coding upstream 252696 739096 ~ 746407 (+)
CI01000300_01115718_01128729 NA coding downstream 115413 1114798 ~ 1128760 (+)
CI01000300_01128973_01131417 ELFN1B coding downstream 129427 1128812 ~ 1131441 (+)
CI01000300_01225430_01228695 PMM2 coding downstream 226045 1225430 ~ 1228987 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 242222 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 273290 1272675 ~ 1273753 (+)
G408522 NA non-coding upstream 3130 995580 ~ 995973 (+)
G408521 NA non-coding upstream 3605 995090 ~ 995498 (+)
G408495 NA non-coding upstream 6274 992278 ~ 992829 (+)
G408501 NA non-coding upstream 11456 987194 ~ 987647 (+)
G408499 NA non-coding upstream 18695 979411 ~ 980408 (+)
G408494 NA non-coding downstream 6293 1005678 ~ 1006915 (+)
G408509 NA non-coding downstream 56431 1055816 ~ 1066158 (+)
G408502 NA non-coding downstream 134786 1134171 ~ 1134489 (+)
G408525 NA non-coding downstream 139039 1138424 ~ 1138656 (+)
G408528 NA non-coding downstream 141753 1141138 ~ 1141432 (+)
G408510 NA other upstream 22004 976600 ~ 977099 (+)
G408498 NA other downstream 17682 1017067 ~ 1020734 (+)
G408910 NA other downstream 633645 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 750515 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1314024 2312515 ~ 2321088 (+)
G409984 NA other downstream 2272300 3271685 ~ 3272398 (+)

Expression


Co-expression Network