G408530


Basic Information

Item Value
gene id G408530
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1142303 ~ 1142683 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469442
CCTTGAGCAAGGCACCTAACCCCCAATCGCTCCCCGGGCACCACAGCAAAATGGCTGCCCACTGGTCCGGGTGTGTGTTCACTACTCACTATTCCTAATGTGTGTGCACTAACTTGGATGGGTTAAATGCAGAGGACAAATTCTGAGTATGGGTTACCATTCTTGGCCTTCACATGTCCCTTTATAAAACTATAAAATATTTTATAATTCTGTCCATAAATCTTACACTAAAAAAAAGAGAGTCCATTACAATGTACAAAGCAATCACCCAATGACAAACACATCAACAATATTAAATTTAAAATCCAATTAAGTCATTTTTCATTATACTTGATAAATCAGACATAATATGGTGACAATTGGGTTTGTACAAAACGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469442 True 381 lncRNA 0.38 1 1142303 1142683

Neighbor

gene id symbol gene type direction distance location
CI01000300_01128973_01131417 ELFN1B coding upstream 10862 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 13543 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 273532 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 315868 806846 ~ 826435 (+)
CI01000300_00781242_00787814 PLK1 coding upstream 354152 780675 ~ 788151 (+)
CI01000300_01225430_01228695 PMM2 coding downstream 82747 1225430 ~ 1228987 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 98924 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 129992 1272675 ~ 1273753 (+)
CI01000300_01275725_01282289 NA coding downstream 132682 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 159224 1301907 ~ 1306339 (+)
G408529 NA non-coding upstream 198 1141871 ~ 1142105 (+)
G408528 NA non-coding upstream 871 1141138 ~ 1141432 (+)
G408525 NA non-coding upstream 3647 1138424 ~ 1138656 (+)
G408502 NA non-coding upstream 7814 1134171 ~ 1134489 (+)
G408509 NA non-coding upstream 76145 1055816 ~ 1066158 (+)
G408531 NA non-coding downstream 1261 1143944 ~ 1144236 (+)
G408532 NA non-coding downstream 2298 1144981 ~ 1145752 (+)
G408533 NA non-coding downstream 3449 1146132 ~ 1146354 (+)
G408508 NA non-coding downstream 4937 1147620 ~ 1147987 (+)
G408503 NA non-coding downstream 7119 1149802 ~ 1150348 (+)
G408498 NA other upstream 121569 1017067 ~ 1020734 (+)
G408510 NA other upstream 165204 976600 ~ 977099 (+)
G408910 NA other downstream 490347 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 607217 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1170726 2312515 ~ 2321088 (+)
G409984 NA other downstream 2129002 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2758505 3901148 ~ 3902892 (+)

Expression


Co-expression Network