G408531


Basic Information

Item Value
gene id G408531
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1143944 ~ 1144236 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469443
CTTAAAGTATCCCAGTTGTTGCCATGGTAGCTCACAGCATATGCAAATTTTCATATAATTATCCCAAAATGGAATATTCATAAAACTTTTATTTTAAAACCCCCAATGTCAATTACCACAAGACATTTTGAAAATTGTGATACATCAAAGTGGCTACTGGTCTCTCAACGCATTTCAAAACCGGTAAGTGACCCAGAATCACTATGGCAACAGCAGCCCTGATCCGTCCCCAAAAGAGGACATACAGTACAGTACAGCGTGGTAAAGGACAGTCACCAATCATTCTTAACGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469443 True 293 lncRNA 0.40 1 1143944 1144236

Neighbor

gene id symbol gene type direction distance location
CI01000300_01128973_01131417 ELFN1B coding upstream 12503 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 15184 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 275173 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 317509 806846 ~ 826435 (+)
CI01000300_00781242_00787814 PLK1 coding upstream 355793 780675 ~ 788151 (+)
CI01000300_01225430_01228695 PMM2 coding downstream 81194 1225430 ~ 1228987 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 97371 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 128439 1272675 ~ 1273753 (+)
CI01000300_01275725_01282289 NA coding downstream 131129 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 157671 1301907 ~ 1306339 (+)
G408530 NA non-coding upstream 1261 1142303 ~ 1142683 (+)
G408529 NA non-coding upstream 1839 1141871 ~ 1142105 (+)
G408528 NA non-coding upstream 2512 1141138 ~ 1141432 (+)
G408525 NA non-coding upstream 5288 1138424 ~ 1138656 (+)
G408502 NA non-coding upstream 9455 1134171 ~ 1134489 (+)
G408532 NA non-coding downstream 745 1144981 ~ 1145752 (+)
G408533 NA non-coding downstream 1896 1146132 ~ 1146354 (+)
G408508 NA non-coding downstream 3384 1147620 ~ 1147987 (+)
G408503 NA non-coding downstream 5566 1149802 ~ 1150348 (+)
G408507 NA non-coding downstream 88048 1232284 ~ 1232485 (+)
G408498 NA other upstream 123210 1017067 ~ 1020734 (+)
G408510 NA other upstream 166845 976600 ~ 977099 (+)
G408910 NA other downstream 488794 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 605664 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1169173 2312515 ~ 2321088 (+)
G409984 NA other downstream 2127449 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2756952 3901148 ~ 3902892 (+)

Expression


Co-expression Network