G408507


Basic Information

Item Value
gene id G408507
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1232284 ~ 1232485 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469419
CTCTGGCACACAGAAGGGCTCCTGTTGCCATGGCGACCTGAAGAGCTTGTGCCAGCCTATCCAGAGCCAGCTGGATATGATTGGCAGCAGAGAGGGATGTGAGCTTCTCACAGAGGCGACTGACTTCCTCTACTAGCGCGGCAACAGACTCCACAGGAAGCACAGCTAGCCGGCCAATCAAATTCTGTTCTGTCAGGTGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469419 True 202 lncRNA 0.56 1 1232284 1232485

Neighbor

gene id symbol gene type direction distance location
CI01000300_01225430_01228695 PMM2 coding upstream 3297 1225430 ~ 1228987 (+)
CI01000300_01128973_01131417 ELFN1B coding upstream 100843 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 103524 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 363513 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 405849 806846 ~ 826435 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 9122 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 40190 1272675 ~ 1273753 (+)
CI01000300_01275725_01282289 NA coding downstream 42880 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 69422 1301907 ~ 1306339 (+)
CI01000300_01331788_01335474 NA coding downstream 97874 1330359 ~ 1335569 (+)
G408503 NA non-coding upstream 81936 1149802 ~ 1150348 (+)
G408508 NA non-coding upstream 84297 1147620 ~ 1147987 (+)
G408533 NA non-coding upstream 85930 1146132 ~ 1146354 (+)
G408532 NA non-coding upstream 86532 1144981 ~ 1145752 (+)
G408531 NA non-coding upstream 88048 1143944 ~ 1144236 (+)
G408504 NA non-coding downstream 100 1232585 ~ 1232878 (+)
G408505 NA non-coding downstream 2517 1235002 ~ 1235214 (+)
G408585 NA non-coding downstream 11634 1244119 ~ 1244349 (+)
G408586 NA non-coding downstream 17495 1249980 ~ 1250183 (+)
G408587 NA non-coding downstream 19619 1252104 ~ 1252469 (+)
G408498 NA other upstream 211550 1017067 ~ 1020734 (+)
G408510 NA other upstream 255185 976600 ~ 977099 (+)
G408910 NA other downstream 400545 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 517415 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1080924 2312515 ~ 2321088 (+)
G409984 NA other downstream 2039200 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2668703 3901148 ~ 3902892 (+)

Expression


Co-expression Network