G408504


Basic Information

Item Value
gene id G408504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1232585 ~ 1232878 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469416
AGCATGAGAAAGACTTGAAGAACACTGAGGTGCAGTTTAGAGTACAGCTCTTCGTATGCTGTTGCTTTTTCACTTTCTCCATGACCATTGGTCAAAGCCAGCTTCCGGCCTCTCTGATAGGCTAATGGAGCTTTCGCACACCAGCGGAGCAGACCCAAAAGAGGCGTGATCTCAAGGCAACCTAACGGCAGGCTGGAATTGAGGGGCGTGTTGATGAAGGTGAGGAGCAGCAGTCTGGGATCCTCCGTGATCCAACCAACCAGCATCTCCAAGAGTGCAGGGGGCGGAGTCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469416 True 294 lncRNA 0.53 1 1232585 1232878

Neighbor

gene id symbol gene type direction distance location
CI01000300_01225430_01228695 PMM2 coding upstream 3598 1225430 ~ 1228987 (+)
CI01000300_01128973_01131417 ELFN1B coding upstream 101144 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 103825 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 363814 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 406150 806846 ~ 826435 (+)
CI01000300_01241607_01253459 RGS11 coding downstream 8729 1241607 ~ 1254009 (+)
CI01000300_01272675_01273342 NA coding downstream 39797 1272675 ~ 1273753 (+)
CI01000300_01275725_01282289 NA coding downstream 42487 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 69029 1301907 ~ 1306339 (+)
CI01000300_01331788_01335474 NA coding downstream 97481 1330359 ~ 1335569 (+)
G408507 NA non-coding upstream 100 1232284 ~ 1232485 (+)
G408503 NA non-coding upstream 82237 1149802 ~ 1150348 (+)
G408508 NA non-coding upstream 84598 1147620 ~ 1147987 (+)
G408533 NA non-coding upstream 86231 1146132 ~ 1146354 (+)
G408532 NA non-coding upstream 86833 1144981 ~ 1145752 (+)
G408505 NA non-coding downstream 2124 1235002 ~ 1235214 (+)
G408585 NA non-coding downstream 11241 1244119 ~ 1244349 (+)
G408586 NA non-coding downstream 17102 1249980 ~ 1250183 (+)
G408587 NA non-coding downstream 19226 1252104 ~ 1252469 (+)
G408588 NA non-coding downstream 21898 1254776 ~ 1254976 (+)
G408498 NA other upstream 211851 1017067 ~ 1020734 (+)
G408510 NA other upstream 255486 976600 ~ 977099 (+)
G408910 NA other downstream 400152 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 517022 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1080531 2312515 ~ 2321088 (+)
G409984 NA other downstream 2038807 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2668310 3901148 ~ 3902892 (+)

Expression


Co-expression Network