G408587


Basic Information

Item Value
gene id G408587
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1252104 ~ 1252469 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469501
GAATTGCAAGTTTATATCCTGCAATTCTGATTTTATAACTGCAAATTAGCATTGGGTCACAAATAAGCAGAGCTGATGCTCATCGGTTGCGGGTCGACACAGGCGCAACTTGTTACATGTAATATACGGATAACATCTTCCTCTGGCATTCCAAAGAAATTAATACGAGTGGAAAATATTTTCTTCCTTCTACCACGCGCTCTCTGTTCTCTGCGTCGCCTCCTAGCAGCAACTATTGCAGCCGTGTCGCAAAACGGGTTAAGACATGCTTTTTTTGGGCATTAAATAATGGCGCAAATACCAGTAAATTGACTAGCGCAAACATTAGTAAATCGTGTTGCGTGATTCATTTAAATACTCTCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469501 True 366 lncRNA 0.41 1 1252104 1252469

Neighbor

gene id symbol gene type direction distance location
CI01000300_01225430_01228695 PMM2 coding upstream 23117 1225430 ~ 1228987 (+)
CI01000300_01128973_01131417 ELFN1B coding upstream 120663 1128812 ~ 1131441 (+)
CI01000300_01115718_01128729 NA coding upstream 123344 1114798 ~ 1128760 (+)
CI01000300_00864011_00867698 UNCX4.1, UNCX coding upstream 383333 862740 ~ 868771 (+)
CI01000300_00807040_00826385 CHTF18 coding upstream 425669 806846 ~ 826435 (+)
CI01000300_01272675_01273342 NA coding downstream 20206 1272675 ~ 1273753 (+)
CI01000300_01275725_01282289 NA coding downstream 22896 1275365 ~ 1282428 (+)
CI01000300_01303949_01305865 NA coding downstream 49438 1301907 ~ 1306339 (+)
CI01000300_01331788_01335474 NA coding downstream 77890 1330359 ~ 1335569 (+)
CI01000300_01343814_01353541 TRIM2, TRIM2B coding downstream 91345 1343814 ~ 1355389 (+)
G408586 NA non-coding upstream 1921 1249980 ~ 1250183 (+)
G408585 NA non-coding upstream 7755 1244119 ~ 1244349 (+)
G408505 NA non-coding upstream 16890 1235002 ~ 1235214 (+)
G408504 NA non-coding upstream 19226 1232585 ~ 1232878 (+)
G408507 NA non-coding upstream 19619 1232284 ~ 1232485 (+)
G408588 NA non-coding downstream 2307 1254776 ~ 1254976 (+)
G408607 NA non-coding downstream 39347 1291816 ~ 1292458 (+)
G408609 NA non-coding downstream 72393 1324862 ~ 1325451 (+)
G408614 NA non-coding downstream 83335 1335804 ~ 1336027 (+)
G408620 NA non-coding downstream 128093 1380562 ~ 1380835 (+)
G408498 NA other upstream 231370 1017067 ~ 1020734 (+)
G408510 NA other upstream 275005 976600 ~ 977099 (+)
G408910 NA other downstream 380561 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 497431 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1060940 2312515 ~ 2321088 (+)
G409984 NA other downstream 2019216 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2648719 3901148 ~ 3902892 (+)

Expression


Co-expression Network