G408628


Basic Information

Item Value
gene id G408628
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1442624 ~ 1442884 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469542
CAAGTATGGTTTTGCAAACAATTTGCACAGAAATTTGTTCTGCTTGTGTTTTATAAATGATGCCCTTTGAATACAAAACATTATTTTCACTAATATTTCCACTCAGTCATATCTAACACTTTCAAAAAAAAAAAAAAAAAAAAAACTCTCAGAAAGCAGCTATAAAAAAATAATTAAAAAAGTGAGGGCATATATAATAAACATTTAAATATAGACAGTGCAATGTTCAAATCATAGATTGAGATATCAAGATATCAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469542 True 261 lncRNA 0.26 1 1442624 1442884

Neighbor

gene id symbol gene type direction distance location
CI01000300_01426499_01431069 RBM46 coding upstream 11360 1426053 ~ 1431264 (+)
CI01000300_01419087_01421103 LRATB coding upstream 21292 1419087 ~ 1421332 (+)
CI01000300_01390134_01416227 LRATB coding upstream 25911 1389724 ~ 1416713 (+)
CI01000300_01373306_01377544 FGB coding upstream 64976 1373220 ~ 1377648 (+)
CI01000300_01343814_01353541 TRIM2, TRIM2B coding upstream 87235 1343814 ~ 1355389 (+)
CI01000300_01480400_01484276 NPY2RL coding downstream 36950 1479834 ~ 1484713 (+)
CI01000300_01513060_01515885 EIF3F coding downstream 70021 1512905 ~ 1515885 (+)
CI01000300_01519715_01526925 NA coding downstream 76695 1519579 ~ 1527151 (+)
CI01000300_01527830_01531871 NA coding downstream 84946 1527830 ~ 1532019 (+)
CI01000300_01571005_01611574 DACHB coding downstream 126728 1569612 ~ 1611574 (+)
G408620 NA non-coding upstream 61789 1380562 ~ 1380835 (+)
G408614 NA non-coding upstream 106597 1335804 ~ 1336027 (+)
G408609 NA non-coding upstream 117173 1324862 ~ 1325451 (+)
G408607 NA non-coding upstream 150166 1291816 ~ 1292458 (+)
G408588 NA non-coding upstream 187648 1254776 ~ 1254976 (+)
G408634 NA non-coding downstream 19271 1462155 ~ 1462416 (+)
G408851 NA non-coding downstream 43950 1486834 ~ 1487716 (+)
G408888 NA non-coding downstream 79966 1522850 ~ 1523234 (+)
G408887 NA non-coding downstream 91426 1534310 ~ 1538291 (+)
G408890 NA non-coding downstream 100022 1542906 ~ 1543240 (+)
G408498 NA other upstream 421890 1017067 ~ 1020734 (+)
G408510 NA other upstream 465525 976600 ~ 977099 (+)
G408910 NA other downstream 190146 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 307016 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 870525 2312515 ~ 2321088 (+)
G409984 NA other downstream 1828801 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2458304 3901148 ~ 3902892 (+)

Expression


Co-expression Network