G408942


Basic Information

Item Value
gene id G408942
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 1684267 ~ 1684594 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469870
AAAGTTCAGAGAGAAAGACGGAAAGGCATTTTCTCTATTGCTTTAGGTTTGGAACAACACATTCTAAATATTCCAAGGGTCTCCAGAATGCTATTGAGTGGACTTCTGCCAAACAATGAAGTTCATACATAAAGTTTCTCTCTTTACCCTAGTGTTTTCTAGATTTTTCAGCAGCTGCTAAAATTTTGGGCTAGTGAAGCAATTTTCTTATGTCATGCACTTCTTAATTTCATTGTAATGACAATAAAGGATATATATTCTATTCTATTCTATTCTATTCTATTCCGTTCTGTTCTATTCTATTCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469870 True 308 lncRNA 0.33 2 1684267 1684594

Neighbor

gene id symbol gene type direction distance location
CI01000300_01571005_01611574 DACHB coding upstream 72693 1569612 ~ 1611574 (+)
CI01000300_01527830_01531871 NA coding upstream 152248 1527830 ~ 1532019 (+)
CI01000300_01519715_01526925 NA coding upstream 157116 1519579 ~ 1527151 (+)
CI01000300_01513060_01515885 EIF3F coding upstream 168382 1512905 ~ 1515885 (+)
CI01000300_01480400_01484276 NPY2RL coding upstream 199554 1479834 ~ 1484713 (+)
CI01000300_01753916_01754815 NA coding downstream 69322 1753916 ~ 1754980 (+)
CI01000300_01772239_01783579 ATP1B1B, ATP1B1 coding downstream 87190 1771784 ~ 1783801 (+)
CI01000300_01801423_01807504 CNGA3 coding downstream 116829 1801423 ~ 1808125 (+)
CI01000300_01976057_01980856 NA coding downstream 291463 1976057 ~ 1981187 (+)
CI01000300_02313596_02320912 NA coding downstream 627921 2312515 ~ 2321088 (+)
G408909 NA non-coding upstream 51384 1632453 ~ 1632883 (+)
G408894 NA non-coding upstream 133879 1546837 ~ 1550388 (+)
G408893 NA non-coding upstream 138029 1545968 ~ 1546238 (+)
G408892 NA non-coding upstream 138422 1545319 ~ 1545845 (+)
G408891 NA non-coding upstream 138995 1543907 ~ 1545272 (+)
G408934 NA non-coding downstream 40830 1725424 ~ 1730427 (+)
G408929 NA non-coding downstream 50904 1735498 ~ 1744773 (+)
G408976 NA non-coding downstream 101900 1786494 ~ 1786724 (+)
G409006 NA non-coding downstream 193692 1878286 ~ 1878873 (+)
G409018 NA non-coding downstream 245637 1930231 ~ 1959590 (+)
G408910 NA other upstream 49298 1633030 ~ 1634969 (+)
G408498 NA other upstream 663533 1017067 ~ 1020734 (+)
G408510 NA other upstream 707168 976600 ~ 977099 (+)
G409984 NA other downstream 1587091 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 2216594 3901148 ~ 3902892 (+)
G410382 NA other downstream 2439104 4123698 ~ 4124416 (+)

Expression


Co-expression Network