Gene
RNA
| Item | Value |
|---|---|
| gene id | G409205 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000300 |
| NCBI id | null |
| chromosome length | 11740502 |
| location | 2464479 ~ 2465111 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU470174 | True | 454 | lncRNA | 0.35 | 2 | 2464479 | 2465111 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000300_02391089_02392297 | CHST12B | coding | upstream | 72135 | 2390518 ~ 2392344 (+) |
| CI01000300_02372157_02389226 | NA | coding | upstream | 75068 | 2371767 ~ 2389411 (+) |
| CI01000300_02356651_02369301 | EIF3B | coding | upstream | 93498 | 2356396 ~ 2370981 (+) |
| CI01000300_02340225_02344792 | NA | coding | upstream | 119503 | 2338788 ~ 2344976 (+) |
| CI01000300_02313596_02320912 | NA | coding | upstream | 143391 | 2312515 ~ 2321088 (+) |
| CI01000300_02477372_02477542 | NA | coding | downstream | 12200 | 2477311 ~ 2477549 (+) |
| CI01000300_02481007_02486342 | SNX8B | coding | downstream | 13763 | 2478874 ~ 2487067 (+) |
| CI01000300_02529181_02537776 | TSPAN5.S, TSPAN5.L, TSPAN5A, TSPAN5B, TSPAN5, TSN5 | coding | downstream | 64070 | 2529181 ~ 2537776 (+) |
| CI01000300_02553990_02570561 | SLC24A2 | coding | downstream | 88362 | 2553473 ~ 2570933 (+) |
| CI01000300_02573883_02577623 | NA | coding | downstream | 107480 | 2572591 ~ 2577623 (+) |
| G409174 | NA | non-coding | upstream | 2500 | 2461090 ~ 2461979 (+) |
| G409155 | NA | non-coding | upstream | 57623 | 2406511 ~ 2406856 (+) |
| G409141 | NA | non-coding | upstream | 126692 | 2337563 ~ 2337787 (+) |
| G409117 | NA | non-coding | upstream | 157590 | 2305069 ~ 2306889 (+) |
| G409172 | NA | non-coding | downstream | 28338 | 2493449 ~ 2505501 (+) |
| G409246 | NA | non-coding | downstream | 120588 | 2585699 ~ 2585913 (+) |
| G409251 | NA | non-coding | downstream | 136630 | 2601741 ~ 2601964 (+) |
| G409163 | NA | non-coding | downstream | 155927 | 2621038 ~ 2630438 (+) |
| CI01000300_02636916_02637474 | NA | non-coding | downstream | 171801 | 2636873 ~ 2637668 (+) |
| CI01000300_01753916_01754815 | NA | other | upstream | 705443 | 1753916 ~ 1754980 (+) |
| G408910 | NA | other | upstream | 829510 | 1633030 ~ 1634969 (+) |
| G408498 | NA | other | upstream | 1443745 | 1017067 ~ 1020734 (+) |
| G408510 | NA | other | upstream | 1487380 | 976600 ~ 977099 (+) |
| G409984 | NA | other | downstream | 806574 | 3271685 ~ 3272398 (+) |
| CI01000300_03901275_03902800 | NA | other | downstream | 1436077 | 3901148 ~ 3902892 (+) |
| G410382 | NA | other | downstream | 1658587 | 4123698 ~ 4124416 (+) |
| G410388 | NA | other | downstream | 1730535 | 4195646 ~ 4196555 (+) |
| CI01000300_05891147_05892754 | HELT | other | downstream | 3425956 | 5891021 ~ 5892824 (+) |
