G409294


Basic Information

Item Value
gene id G409294
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 2801289 ~ 2801570 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU470268
TTTTTTTTAAAATTCATGTGCTCTCGTAATCTTTAATCAAAAACATTAACCTCCCCTCCCACTCAAAACGACTCATAGTCTCTTCCTGTCACATGCTATGGCACGAGGGCGGAGCTATCTGGAACTGCCAGAAGATCCAGTGACATAAGGGGGAAATGCTAAAGCTGATGTTTCACTTTATAGAGATCAATGCATTAACCACCGCTGATGCCAGTCATTGGGGTGTACAGTACCCTTAAACATTGAAAGGATATTACGAAAACACTACTCTTTGGACATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU470268 True 282 lncRNA 0.42 1 2801289 2801570

Neighbor

gene id symbol gene type direction distance location
CI01000300_02772428_02774786 NA coding upstream 26315 2772307 ~ 2774974 (+)
CI01000300_02744370_02753382 CLTA coding upstream 47336 2744370 ~ 2753953 (+)
CI01000300_02738497_02743503 NANS, SIAS, NANSA coding upstream 57746 2738497 ~ 2743543 (+)
CI01000300_02723637_02737142 GNE coding upstream 63398 2723637 ~ 2737891 (+)
CI01000300_02686699_02695556 TMOD1 coding upstream 105261 2686699 ~ 2696028 (+)
CI01000300_02990347_03008777 PCDH10, PCDH10A coding downstream 188128 2989698 ~ 3008864 (+)
CI01000300_03694786_03699730 NOCTB coding downstream 893216 3694786 ~ 3699973 (+)
CI01000300_03744731_03749017 NA coding downstream 942840 3744410 ~ 3749023 (+)
CI01000300_03752633_03755353 NA coding downstream 951063 3752633 ~ 3756860 (+)
CI01000300_03769789_03773233 NA coding downstream 966629 3768199 ~ 3773262 (+)
G409292 NA non-coding upstream 8767 2792314 ~ 2792522 (+)
G409284 NA non-coding upstream 24930 2776147 ~ 2776359 (+)
G409273 NA non-coding upstream 90400 2710673 ~ 2710889 (+)
G409188 NA non-coding upstream 161379 2639522 ~ 2639910 (+)
CI01000300_02636916_02637474 NA non-coding upstream 163621 2636873 ~ 2637668 (+)
G409295 NA non-coding downstream 18955 2820525 ~ 2820766 (+)
G409301 NA non-coding downstream 36618 2838188 ~ 2838672 (+)
G409302 NA non-coding downstream 46023 2847593 ~ 2847932 (+)
G409306 NA non-coding downstream 61476 2863046 ~ 2863624 (+)
G409308 NA non-coding downstream 68611 2870181 ~ 2870452 (+)
CI01000300_02313596_02320912 NA other upstream 487395 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 1042253 1753916 ~ 1754980 (+)
G408910 NA other upstream 1166320 1633030 ~ 1634969 (+)
G408498 NA other upstream 1780555 1017067 ~ 1020734 (+)
G408510 NA other upstream 1824190 976600 ~ 977099 (+)
G409984 NA other downstream 470115 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 1099618 3901148 ~ 3902892 (+)
G410382 NA other downstream 1322128 4123698 ~ 4124416 (+)
G410388 NA other downstream 1394076 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 3089497 5891021 ~ 5892824 (+)

Expression


Co-expression Network