G409309


Basic Information

Item Value
gene id G409309
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 2871893 ~ 2872224 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU470283
AAATCATCAGCAACAATTCTTATTACTGATTAGTCGGGTCTGCCCACCGTGCACAGAAAACTTCTGCCAGCCGCAACAAACTACAGCACTGAATAATGCATTTCTATTGACAAAAATACATATAAAAATAGTGTAGGAAGCAGAGTGAGCTGCTGCAGGAGAGGTACATGATCCAAACTGCCCAAAACATGAGAATTCTTTATTTTAAGCTTCAAGCTAATGCATTAGTGTAATGGTTTGCCCTGTCAGGCGCTTTGACAGATGCATGTGCGTCCTCAGCGCAAAACGTTCATTCTACGGTTATCCCCTTATCTGTAAACGTTACAAATTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU470283 True 332 lncRNA 0.41 1 2871893 2872224

Neighbor

gene id symbol gene type direction distance location
CI01000300_02772428_02774786 NA coding upstream 96919 2772307 ~ 2774974 (+)
CI01000300_02744370_02753382 CLTA coding upstream 117940 2744370 ~ 2753953 (+)
CI01000300_02738497_02743503 NANS, SIAS, NANSA coding upstream 128350 2738497 ~ 2743543 (+)
CI01000300_02723637_02737142 GNE coding upstream 134002 2723637 ~ 2737891 (+)
CI01000300_02686699_02695556 TMOD1 coding upstream 175865 2686699 ~ 2696028 (+)
CI01000300_02990347_03008777 PCDH10, PCDH10A coding downstream 117474 2989698 ~ 3008864 (+)
CI01000300_03694786_03699730 NOCTB coding downstream 822562 3694786 ~ 3699973 (+)
CI01000300_03744731_03749017 NA coding downstream 872186 3744410 ~ 3749023 (+)
CI01000300_03752633_03755353 NA coding downstream 880409 3752633 ~ 3756860 (+)
CI01000300_03769789_03773233 NA coding downstream 895975 3768199 ~ 3773262 (+)
G409308 NA non-coding upstream 1441 2870181 ~ 2870452 (+)
G409306 NA non-coding upstream 8269 2863046 ~ 2863624 (+)
G409302 NA non-coding upstream 23961 2847593 ~ 2847932 (+)
G409301 NA non-coding upstream 33221 2838188 ~ 2838672 (+)
G409295 NA non-coding upstream 51127 2820525 ~ 2820766 (+)
G409310 NA non-coding downstream 1615 2873839 ~ 2874044 (+)
G409319 NA non-coding downstream 41670 2913894 ~ 2914118 (+)
G409329 NA non-coding downstream 94923 2967147 ~ 2967362 (+)
G409334 NA non-coding downstream 103202 2975426 ~ 2975682 (+)
G409336 NA non-coding downstream 144683 3016907 ~ 3018272 (+)
CI01000300_02313596_02320912 NA other upstream 557999 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 1112857 1753916 ~ 1754980 (+)
G408910 NA other upstream 1236924 1633030 ~ 1634969 (+)
G408498 NA other upstream 1851159 1017067 ~ 1020734 (+)
G408510 NA other upstream 1894794 976600 ~ 977099 (+)
G409984 NA other downstream 399461 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 1028964 3901148 ~ 3902892 (+)
G410382 NA other downstream 1251474 4123698 ~ 4124416 (+)
G410388 NA other downstream 1323422 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 3018843 5891021 ~ 5892824 (+)

Expression


Co-expression Network