G409970


Basic Information

Item Value
gene id G409970
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3184510 ~ 3184728 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU471019
AGTAGGGCTGGGCGATAAAACGATAACGATATGTATCGCGATAGACACGTGATCGATATCAATAAAAAATGTGTTCGATAAAACGTTCGATATTTTTTTATTCTTCGTCGGAAGAAAACAGAGGTTGCGAAGCAAGTTTGGTTGCATTAACAAAGGCACTCGCTTTCTGGTAACCTAGCAACGTAGGGAGTGACACGCTAACAGCCAATCATGTAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471019 True 219 lncRNA 0.41 1 3184510 3184728

Neighbor

gene id symbol gene type direction distance location
CI01000300_02990347_03008777 PCDH10, PCDH10A coding upstream 175646 2989698 ~ 3008864 (+)
CI01000300_02772428_02774786 NA coding upstream 409536 2772307 ~ 2774974 (+)
CI01000300_02744370_02753382 CLTA coding upstream 430557 2744370 ~ 2753953 (+)
CI01000300_02738497_02743503 NANS, SIAS, NANSA coding upstream 440967 2738497 ~ 2743543 (+)
CI01000300_02723637_02737142 GNE coding upstream 446619 2723637 ~ 2737891 (+)
CI01000300_03694786_03699730 NOCTB coding downstream 510058 3694786 ~ 3699973 (+)
CI01000300_03744731_03749017 NA coding downstream 559682 3744410 ~ 3749023 (+)
CI01000300_03752633_03755353 NA coding downstream 567905 3752633 ~ 3756860 (+)
CI01000300_03769789_03773233 NA coding downstream 583471 3768199 ~ 3773262 (+)
CI01000300_03773519_03831065 NA coding downstream 588634 3773362 ~ 3831422 (+)
G409357 NA non-coding upstream 107996 3076303 ~ 3076514 (+)
G409336 NA non-coding upstream 166238 3016907 ~ 3018272 (+)
G409334 NA non-coding upstream 208828 2975426 ~ 2975682 (+)
G409329 NA non-coding upstream 217148 2967147 ~ 2967362 (+)
G409319 NA non-coding upstream 270392 2913894 ~ 2914118 (+)
G409975 NA non-coding downstream 33117 3217845 ~ 3288158 (+)
G410148 NA non-coding downstream 215852 3400580 ~ 3400787 (+)
G410172 NA non-coding downstream 250965 3435693 ~ 3435892 (+)
G410238 NA non-coding downstream 366790 3551518 ~ 3551735 (+)
G410240 NA non-coding downstream 368101 3552829 ~ 3553035 (+)
CI01000300_02313596_02320912 NA other upstream 870616 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 1425474 1753916 ~ 1754980 (+)
G408910 NA other upstream 1549541 1633030 ~ 1634969 (+)
G408498 NA other upstream 2163776 1017067 ~ 1020734 (+)
G408510 NA other upstream 2207411 976600 ~ 977099 (+)
G409984 NA other downstream 86957 3271685 ~ 3272398 (+)
CI01000300_03901275_03902800 NA other downstream 716460 3901148 ~ 3902892 (+)
G410382 NA other downstream 938970 4123698 ~ 4124416 (+)
G410388 NA other downstream 1010918 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 2706339 5891021 ~ 5892824 (+)

Expression


Co-expression Network