G410242


Basic Information

Item Value
gene id G410242
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3553750 ~ 3553986 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU471317
ATCTCCATGCACTCCGCTGAAATGTATTAAACGTACTTAATAAAAACAGAGAAATATATGTCAGTAATATCCATAAAATAAGTAAATTAGCCAATTTTGTTTAAATGAAGGATTGCAGAAATGAGTACACCCTAGATTTAATTCAACAAATGTATAATATTCTAGTACTTAGTATGTTCTCCATAAATTTTAAGTATACTGCTCTGACCCTTCTTGACATGGAGTGTACAAGTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471317 True 237 lncRNA 0.30 1 3553750 3553986

Neighbor

gene id symbol gene type direction distance location
CI01000300_02990347_03008777 PCDH10, PCDH10A coding upstream 544886 2989698 ~ 3008864 (+)
CI01000300_02772428_02774786 NA coding upstream 778776 2772307 ~ 2774974 (+)
CI01000300_02744370_02753382 CLTA coding upstream 799797 2744370 ~ 2753953 (+)
CI01000300_02738497_02743503 NANS, SIAS, NANSA coding upstream 810207 2738497 ~ 2743543 (+)
CI01000300_02723637_02737142 GNE coding upstream 815859 2723637 ~ 2737891 (+)
CI01000300_03694786_03699730 NOCTB coding downstream 140800 3694786 ~ 3699973 (+)
CI01000300_03744731_03749017 NA coding downstream 190424 3744410 ~ 3749023 (+)
CI01000300_03752633_03755353 NA coding downstream 198647 3752633 ~ 3756860 (+)
CI01000300_03769789_03773233 NA coding downstream 214213 3768199 ~ 3773262 (+)
CI01000300_03773519_03831065 NA coding downstream 219376 3773362 ~ 3831422 (+)
G410240 NA non-coding upstream 715 3552829 ~ 3553035 (+)
G410238 NA non-coding upstream 2015 3551518 ~ 3551735 (+)
G410172 NA non-coding upstream 117858 3435693 ~ 3435892 (+)
G410148 NA non-coding upstream 152963 3400580 ~ 3400787 (+)
G409975 NA non-coding upstream 265592 3217845 ~ 3288158 (+)
G410253 NA non-coding downstream 29894 3583880 ~ 3584114 (+)
G410263 NA non-coding downstream 153481 3707467 ~ 3718742 (+)
G410334 NA non-coding downstream 321906 3875892 ~ 3876102 (+)
G410335 NA non-coding downstream 322699 3876685 ~ 3877036 (+)
G410345 NA non-coding downstream 357388 3911374 ~ 3913993 (+)
G409984 NA other upstream 281352 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1239856 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 1794714 1753916 ~ 1754980 (+)
G408910 NA other upstream 1918781 1633030 ~ 1634969 (+)
G408498 NA other upstream 2533016 1017067 ~ 1020734 (+)
CI01000300_03901275_03902800 NA other downstream 347202 3901148 ~ 3902892 (+)
G410382 NA other downstream 569712 4123698 ~ 4124416 (+)
G410388 NA other downstream 641660 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 2337081 5891021 ~ 5892824 (+)
G411777 NA other downstream 2915259 6469245 ~ 6469705 (+)

Expression


Co-expression Network