G410345


Basic Information

Item Value
gene id G410345
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3911374 ~ 3913993 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU471427
TGTGCTTTTGTCACTGGCAGGATGATGGCAGCCATTTTGCTGAGCATGTCATCCACGGAGGAGTAGTCATGTGACACCAGCTGGGCCAACTCCACCAGTACCTGGTTGCGTTTGCTCTCTTGTTCAGAACTCTCACACAGCTGACTGTTTTCCAGGATCAGTCCGAACAACACCATGTGTGACGACAGCACTTTCTCATCTTGCTCAGAGAAACAGCTGCCCGGCCTGTTTTTGTTCACAGCCATGATGACACCTATAACCTCCTTTTTGTGGTTCAGGATGGGTACACTGAGAATACTCTTGGGTCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471427 True 311 lncRNA 0.50 4 3911374 3913993

Neighbor

gene id symbol gene type direction distance location
CI01000300_03901275_03902800 NA coding upstream 8482 3901148 ~ 3902892 (+)
CI01000300_03773519_03831065 NA coding upstream 79952 3773362 ~ 3831422 (+)
CI01000300_03769789_03773233 NA coding upstream 138112 3768199 ~ 3773262 (+)
CI01000300_03752633_03755353 NA coding upstream 154514 3752633 ~ 3756860 (+)
CI01000300_03744731_03749017 NA coding upstream 162351 3744410 ~ 3749023 (+)
CI01000300_03924558_03934407 PPP2R2CA, PPP2R2C coding downstream 10565 3924558 ~ 3935360 (+)
CI01000300_03954605_03969070 CRMP1 coding downstream 40612 3954605 ~ 3970439 (+)
CI01000300_03972562_03976190 NA coding downstream 58569 3972562 ~ 3976225 (+)
CI01000300_03981015_03991839 NA coding downstream 67022 3981015 ~ 3992010 (+)
CI01000300_03994394_03997804 CHIC2 coding downstream 80401 3994394 ~ 3998763 (+)
G410335 NA non-coding upstream 34338 3876685 ~ 3877036 (+)
G410334 NA non-coding upstream 35272 3875892 ~ 3876102 (+)
G410263 NA non-coding upstream 192632 3707467 ~ 3718742 (+)
G410253 NA non-coding upstream 327260 3583880 ~ 3584114 (+)
G410242 NA non-coding upstream 357388 3553750 ~ 3553986 (+)
G410320 NA non-coding downstream 2768 3916761 ~ 3938947 (+)
G410323 NA non-coding downstream 25044 3939037 ~ 3939682 (+)
G410353 NA non-coding downstream 38837 3952830 ~ 3953045 (+)
G410354 NA non-coding downstream 39183 3953176 ~ 3953414 (+)
G410359 NA non-coding downstream 65051 3979044 ~ 3979269 (+)
G409984 NA other upstream 638976 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1597480 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2152338 1753916 ~ 1754980 (+)
G408910 NA other upstream 2276405 1633030 ~ 1634969 (+)
G410382 NA other downstream 209705 4123698 ~ 4124416 (+)
G410388 NA other downstream 281653 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1977074 5891021 ~ 5892824 (+)
G411777 NA other downstream 2555252 6469245 ~ 6469705 (+)
G413459 NA other downstream 5030490 8857687 ~ 8948603 (+)

Expression


Co-expression Network