Gene
RNA
| Item | Value |
|---|---|
| gene id | G410368 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000300 |
| NCBI id | null |
| chromosome length | 11740502 |
| location | 4083018 ~ 4085182 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU471452 | True | 1805 | lncRNA | 0.45 | 2 | 4083018 | 4085182 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000300_04054526_04057476 | NA | coding | upstream | 25505 | 4053498 ~ 4057513 (+) |
| CI01000300_04035454_04049805 | STIM2A | coding | upstream | 33197 | 4034317 ~ 4049821 (+) |
| CI01000300_04021130_04027987 | RBPJ.S, RBPJ, RBPJA | coding | upstream | 53409 | 4019875 ~ 4029609 (+) |
| CI01000300_04008515_04015444 | SLC34A2A | coding | upstream | 67462 | 4006977 ~ 4015556 (+) |
| CI01000300_03994394_03997804 | CHIC2 | coding | upstream | 84255 | 3994394 ~ 3998763 (+) |
| CI01000300_04100876_04103178 | NA | coding | downstream | 15694 | 4100876 ~ 4104415 (+) |
| CI01000300_04105718_04107800 | NA | coding | downstream | 20536 | 4105718 ~ 4107849 (+) |
| CI01000300_04211928_04219961 | NA | coding | downstream | 125987 | 4211169 ~ 4220143 (+) |
| CI01000300_04391216_04429569 | PCDH7A | coding | downstream | 305576 | 4390758 ~ 4430154 (+) |
| CI01000300_04439356_04442462 | NA | coding | downstream | 354036 | 4439218 ~ 4442690 (+) |
| G410383 | NA | non-coding | upstream | 29697 | 4050447 ~ 4053321 (+) |
| G410366 | NA | non-coding | upstream | 63277 | 4019536 ~ 4019741 (+) |
| G410359 | NA | non-coding | upstream | 103749 | 3979044 ~ 3979269 (+) |
| G410354 | NA | non-coding | upstream | 129604 | 3953176 ~ 3953414 (+) |
| G410353 | NA | non-coding | upstream | 129973 | 3952830 ~ 3953045 (+) |
| G410375 | NA | non-coding | downstream | 41994 | 4127176 ~ 4129355 (+) |
| G410649 | NA | non-coding | downstream | 185133 | 4270315 ~ 4270720 (+) |
| G410659 | NA | non-coding | downstream | 222388 | 4307570 ~ 4307813 (+) |
| G410710 | NA | non-coding | downstream | 319619 | 4404801 ~ 4407968 (+) |
| G410733 | NA | non-coding | downstream | 443850 | 4529032 ~ 4560250 (+) |
| CI01000300_03901275_03902800 | NA | other | upstream | 180867 | 3901148 ~ 3902892 (+) |
| G409984 | NA | other | upstream | 810620 | 3271685 ~ 3272398 (+) |
| CI01000300_02313596_02320912 | NA | other | upstream | 1769124 | 2312515 ~ 2321088 (+) |
| CI01000300_01753916_01754815 | NA | other | upstream | 2323982 | 1753916 ~ 1754980 (+) |
| G408910 | NA | other | upstream | 2448049 | 1633030 ~ 1634969 (+) |
| G410382 | NA | other | downstream | 38516 | 4123698 ~ 4124416 (+) |
| G410388 | NA | other | downstream | 110464 | 4195646 ~ 4196555 (+) |
| CI01000300_05891147_05892754 | HELT | other | downstream | 1805885 | 5891021 ~ 5892824 (+) |
| G411777 | NA | other | downstream | 2384063 | 6469245 ~ 6469705 (+) |
| G413459 | NA | other | downstream | 4859301 | 8857687 ~ 8948603 (+) |
