G410375


Basic Information

Item Value
gene id G410375
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4127176 ~ 4129355 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU471463
TTCCACGTTTCAGTTTTGTGTTCAACGGCTCCAGTAACTCCTATGATCTACATATAGAGAATGTCAGTGTCTCTGATGAGGGAATATATTACTGTGCGAAAAGAAAAAGAGAAGTATCTGAAGACGTACACGGCATCACGGCAAAATATGAGTTTGAGTATGGAAACAAGATAACACGTTTATCTGTCTTGGAGTCAGTGTCTCCTCATGCAGAGCAGTTTAACATCACCTCCACTCCTCCTGTGTTAGACTGTATGCTCAGCTTCAAGCTACTGTTCGGTGTGTGTCCTGCGTGTGTTCTCCTCTTCTCTCTTCTCTCTTCCATTGCTGTGTACTGCCTCTGTCCGAGGAAAATTACAGGCTCCGGTCTGAGCGCTGAGATACTCAAAGCTAATGTTCTTCAGGCAGATTCTATGGAGAAACATCTGTGTGAGATGAATAAAACTGGAAAGATCTGCCTCCACACTGAAGTCTCTTATAGACTGCTGACATCTGAACATCCCTATGCCAAGATGTGATTCTACTTCCTCATTCAAACACTCTCAGCTGTTGCTAGTAGGACCTGTATAGCTGCTTACGGCATGCTTTTTTTGTATATATTTTTTTTGTAAATACATTGCACTAATCCATGCTGTTGGTCTAAAAAGTAAAAGTAAACTCATACGGTTTTGTATCTATGTTTTTATCTGTAGATCATATGAATATTTATCTCAAACATTTATCTCATATATTTGGGTCTAAATTGTCAAATAATGTTCAGTCAGTAATATGCACAAGTTTGTCAAATGTTTAGGCAGAATTGTCTTATGCTTATGCTTATGTTAGGAGAGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471463 True 833 lncRNA 0.39 4 4127176 4129355

Neighbor

gene id symbol gene type direction distance location
CI01000300_04105718_04107800 NA coding upstream 19327 4105718 ~ 4107849 (+)
CI01000300_04100876_04103178 NA coding upstream 22761 4100876 ~ 4104415 (+)
CI01000300_04054526_04057476 NA coding upstream 69663 4053498 ~ 4057513 (+)
CI01000300_04035454_04049805 STIM2A coding upstream 77355 4034317 ~ 4049821 (+)
CI01000300_04021130_04027987 RBPJ.S, RBPJ, RBPJA coding upstream 97567 4019875 ~ 4029609 (+)
CI01000300_04211928_04219961 NA coding downstream 81814 4211169 ~ 4220143 (+)
CI01000300_04391216_04429569 PCDH7A coding downstream 261403 4390758 ~ 4430154 (+)
CI01000300_04439356_04442462 NA coding downstream 309863 4439218 ~ 4442690 (+)
CI01000300_04443587_04462530 HGSNAT coding downstream 314232 4443587 ~ 4462719 (+)
CI01000300_04465330_04479739 PI4K2B coding downstream 335743 4465098 ~ 4481238 (+)
G410368 NA non-coding upstream 41994 4083018 ~ 4085182 (+)
G410383 NA non-coding upstream 73855 4050447 ~ 4053321 (+)
G410366 NA non-coding upstream 107435 4019536 ~ 4019741 (+)
G410359 NA non-coding upstream 147907 3979044 ~ 3979269 (+)
G410354 NA non-coding upstream 173762 3953176 ~ 3953414 (+)
G410649 NA non-coding downstream 140960 4270315 ~ 4270720 (+)
G410659 NA non-coding downstream 178215 4307570 ~ 4307813 (+)
G410710 NA non-coding downstream 275446 4404801 ~ 4407968 (+)
G410733 NA non-coding downstream 399677 4529032 ~ 4560250 (+)
G410776 NA non-coding downstream 527415 4656770 ~ 4658791 (+)
G410382 NA other upstream 2760 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 225025 3901148 ~ 3902892 (+)
G409984 NA other upstream 854778 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1813282 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2368140 1753916 ~ 1754980 (+)
G410388 NA other downstream 66291 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1761712 5891021 ~ 5892824 (+)
G411777 NA other downstream 2339890 6469245 ~ 6469705 (+)
G413459 NA other downstream 4815128 8857687 ~ 8948603 (+)
G414249 NA other downstream 6240556 10369911 ~ 10373898 (+)

Expression


Co-expression Network