G410710


Basic Information

Item Value
gene id G410710
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4404801 ~ 4407968 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU471845
CTTTTGTCATGCTTTAAAGAAGTACACTTATTTTGAAGTGCTGACTAATGTACTAAAGCACGTACTTTATTATAATTTTTGACTGTAGTGTGTTATTCAATATTACTTTTAAAGTTAATATATGTACTAAATTGCAACTTCATCTTTAAAAATGTGTAATTAAAATAAATTTAAATGCATGGCATACACGTTTCAATATAAATGACATTAAAGTATATTTTAGTCACTTTAATCATATTTCAAAGACAATAGAAGTAATTGTGAAATCCCTGTCCTACTTAAGTGGGCCAAAATGCATTCTAATGTTCAGTTAATTGAATTTAATATAAACTTAAACTACAATGCATTTTCATTTAATTGCAATCAACATGCAATTAAGTATCTGAAAATTACATTCAGTTTCTTTTAAATATATATTTCCTAATTCCCTGTGTTCTCTCTCTCTTTTTTTAAGTTGGATTTTCATGTTTTATTAGGACTTTCCATAGACATAATAATCATTTTTACATTTTCAAAAAACATCACTTAGTATGAATTATAAGCTGATTCCTCATGGGGACCAAAAAATGTCCCAACAAGGACAAGGATTTTGGATATTGCCATCTTTTGTCCCCATAACGTAGGGTATACTTGAAACACAGACACACACACGTTTTTTTTTTTTTTTGCACTATCATTATGAGGACATTTCATAGACATAATGGTTTTTATACTGTACAAAACTGTATATTCTAGCCGCCTACACTAACCATACCCATAAACTTACCCATCACAGAAAACTTTCTGAATTTTTACATTTAAAACATTTAGTATGTTTTTAAGCCATTTTATTTACGAGGACTCAGGAAATGTCCTCATAAACCATGTTTACGTTGTAATACCAGTGTAATACCTATGTCATTATACAATTAGATGTCCTCATAAATCATATAAACAAGCACACACACAACTAGTCTAAGTTGTGGGCTACGATTTCTTATTGTTGCTAAATGGATTGATTTTTTTCTTCTCCTGTGTTGATATTACCAGAGGCAGCACTATAAACTGTCTTTTCCCGAACTGTGCTCTGTTCTAAGCTTCTTAGGTTAGTGATAGAGGGTTGTAAAGGCATGAGGATGAGTAAATGATAGCCAAACTTCAATTCTTTGGGTGAACTAACCTTTTTAGCCTTTTGTAGCATCAGATTTAGTCTCCATCTGGCCACTATTGCTGACCTGTTCTCAGTTTATATCACCATTCCTTAAAATACAGTGGTTGTGGCAGTTTTAGTATCTCATAAGAAAACATGGCAGCAATCTCCTTCAGGAGCGCTGTAAGCCATCAGTTATATTCGGATCTGATAAAGCGTACAGTATGATATTCCGCATAACATTTGACATTTGTTTGAGCTGCAGGCTAGTGGTTAGATACATTGAGCTGTGGTTTTCATGTGAGAAATGTAGGTTTGAATCTGGCGTGTATTGATTCTATTCCCCTCATCATTTTAAGTTATGTCTACTTCCATTCTCAGTAATGGTGAAAAATAATAAATAATTATGACATCTGTATATGTACAGTATATAACAGATACTTGAGACATAATAACCAAGTTCCAAATGGATGTTCAGGAGGAGCATGTTCATCTAATTCTGCTAATCATGCCACGAAGGATATATACACAGCTGTTTACCTCACTCCTTTGATAATTCTTCTGGCAGCTCTCCACCACCCTGACTCCACCTTAATTTCTATAATTAAATACTTCCGGGAGGTGGGGGTGGACTCAAGCCCCTTCATTGTGGACAGCAAACCCAACCAGTTTACCTTCAGCACGTTCAAGGATATGATGAACATTCTGAACTCATCAAATTGATGTTTACAACAACCTGGTCTTTAAAGAGCGGTGCCTATATTGTCAGGTGTCTTTATGGTGGTTTATGCTGGTCATTATTCTGCTGGATTGGTATTTATTAAAGTGCAGAGTGATTTAACGTTTGCATTTAATGGTCTGAATATTTTATAGCCTAAAACGGCAGCTAAAAAGAAAAAAGAAAAAAAACAGTAGCAGAGGGAATGGAGAGCTGAACAGTGCTTTGAAACTAGCTTGTCAAATTATGCTTTTGAAAAGGTAGTTAGCTACTCTACAATACCTTTTTTAATATATATGCTTTATTTATTTATTTATTTTTTGTTTGTTTGTATCAAAAAAAAAAAATTTGTATCAAAACAAAAAGCATTTGACCAATTTATTTACACTAAATTACATGTATAAAGCTAGAAATCAACATAATTTATATTAAAAGCATTTTAGCCAAATATTATTATTTTTAAATTGCTAAAAATATTGTTAATGTTTTTATATGGCTAGAAAATGGAAAAATTGCTACACAGTGCATCTGCACTTGGACTCAAATGAATCCATTCTATTTTTAAAAAAAAAAACATAATTTATATTTGCTGTATATGCCTGCAACCCCTTCAGCCGTGACTTATTCATGATACAGCACTAGCCTCGAGTACCTTATTGCTTTTATAAAACGGTTACCACACAATACAAATATTAAAGCCAAAAATATGTATCAGTGCAACTTTCATGAAGTAAACTTTAACTAAAAGCCTTCCTTCCGCCGGAAAAATAGTCCCTGACCGTGAACAGCAACAGAAGTTACATTATTACTCCATTAGATGGCGGAAGACTGTCATTATGAGTGTGTCAGTCAGTAGCGAAGACTTTTACATTGAAGAGACTGTTGAATTGTTGTGAACGGAACAAGACGCAACTGACAAATGTTTTGACTAGCGCTGTCAGTCACGGGAAAACCCCTTAACTGTTAAAAGGACAAGATAATACATCGGACATTTAAACAGATTTTTTATTATGAACATAGGACTGACCTGAAGGAAAATGCTAAATCTGAATGCAGGTAATAAACTTGCTCAATCGATCTCTTTCTCACAATACTCTTCTACATAATACAGTAAGCTTCAATGAACAATATCAACTGAGAACATACAGTTTACGTTGCTAAGAGTGGTTGCTAAGGGTATTGTGTAGTGATACACATATTTAATCGTGAATAAAACACAGCTATTGACCAATCAGAATCAAGGACAGGAACTAACTATTTTATAAAAAAGACATAGTGACCAACAGTGACATAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471845 True 3144 lncRNA 0.33 2 4404801 4407968

Neighbor

gene id symbol gene type direction distance location
CI01000300_04211928_04219961 NA coding upstream 184658 4211169 ~ 4220143 (+)
CI01000300_04105718_04107800 NA coding upstream 296952 4105718 ~ 4107849 (+)
CI01000300_04100876_04103178 NA coding upstream 300386 4100876 ~ 4104415 (+)
CI01000300_04054526_04057476 NA coding upstream 347288 4053498 ~ 4057513 (+)
CI01000300_04035454_04049805 STIM2A coding upstream 354980 4034317 ~ 4049821 (+)
CI01000300_04439356_04442462 NA coding downstream 31250 4439218 ~ 4442690 (+)
CI01000300_04443587_04462530 HGSNAT coding downstream 35619 4443587 ~ 4462719 (+)
CI01000300_04465330_04479739 PI4K2B coding downstream 57130 4465098 ~ 4481238 (+)
CI01000300_05022837_05027540 NA coding downstream 614869 5022837 ~ 5028915 (+)
CI01000300_05031151_05064873 TUSC3 coding downstream 622980 5030948 ~ 5065564 (+)
G410659 NA non-coding upstream 96988 4307570 ~ 4307813 (+)
G410649 NA non-coding upstream 134081 4270315 ~ 4270720 (+)
G410375 NA non-coding upstream 275446 4127176 ~ 4129355 (+)
G410368 NA non-coding upstream 319619 4083018 ~ 4085182 (+)
G410383 NA non-coding upstream 351480 4050447 ~ 4053321 (+)
G410733 NA non-coding downstream 121064 4529032 ~ 4560250 (+)
G410776 NA non-coding downstream 248802 4656770 ~ 4658791 (+)
G410778 NA non-coding downstream 269580 4677548 ~ 4679504 (+)
G410820 NA non-coding downstream 391316 4799284 ~ 4799529 (+)
G410965 NA non-coding downstream 651927 5059895 ~ 5071843 (+)
G410388 NA other upstream 208246 4195646 ~ 4196555 (+)
G410382 NA other upstream 280385 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 502650 3901148 ~ 3902892 (+)
G409984 NA other upstream 1132403 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 2090907 2312515 ~ 2321088 (+)
CI01000300_05891147_05892754 HELT other downstream 1483099 5891021 ~ 5892824 (+)
G411777 NA other downstream 2061277 6469245 ~ 6469705 (+)
G413459 NA other downstream 4536515 8857687 ~ 8948603 (+)
G414249 NA other downstream 5961943 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 6191968 10604458 ~ 10605033 (+)

Expression


Co-expression Network