G410733


Basic Information

Item Value
gene id G410733
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 4529032 ~ 4560250 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU471870
TATATATATATATATATATATATATACATACATACACACACACACACACACACACACAGTCAAACCAAAATTTATTCAGACACCTTGACCATTTCATTCATTAATACAGTTTATTGACCATAGTTTAAAAAATGGTAATAAAATATGACAAGATCTCAGGGATAAACTGTGTCAGAAAAAAAATGAATCTTAATTATGTCAGATAACACTTAAGCAAAACATGGTCAGGTCAAAGTGTCTGAATAATTTTTGGTTCTACATTTTTATCAATTTTACTGGTAGTCCACTGTATTAAGATTTTTGAGTATAATATGTCACAGTTTATTTTGCTATCCTCACTTACACAAATTAACTACTGTATATATATATACAGTAGTATATATATACACATACGTACATATATAGTGCATTCTGTTGTTCTCCATACAGTTTTTATACACAAGAGTCTTGTGGCAACAACCCACTAAGAAACCCAGTCAATCGAATCCAGTCTATGGTCATCCTTTGTCAAGTTGTTCAGGCATACCATCACTATTTCTGAAAATACCCACATCCCTACATACAATGTCTTTATACTTTCATTACTACCTGAAGCAATTATTTTCCTCCACACTTTTTAATTATCAAGCCGGAAGAAAAGAATGGGAGGAGTATTCCAAATTAAAAATATAAAATGTGAAAGAAAACACTCCGTATCACTAGCCAGGCCTGTATGTGTATGTGGTTGCTGCTTGTGTTCATGCAATCATGGATCTGAGGAAACTGCTTCCAGGAAGTAGCAAGCTTGTGTGGCTAATCCCAGCACTGACAGTTTCTCAAGCACTCCATTACAATTTCACCCCTTTCCTCTCCTCTCTTCCCAGAGACTTTCTTACCAACCTGTACCAGGACTGACCTGGCTCTACCCAGCTGGGGCTTGACCCTAAATGCAGGTGAGGTAGAGAGATCAGAAGTTAGCAATAGACCCATTGTTCTGGACCCAGAGCCTGAGCCGTGACAGGGGGAATGGGTGTGATAGGGGCAGGAATTCTCTAGGATGAACGCACATCAAAGAACTACAGGCAAAAGGCCCGAGAGGGAGGCGTTCTGCGGACATGATTATAGGTACCGAACTCACTGGTGATAAGGAAGAATGAGAGGTTATTGTTGCGCTTGACAGGCACAGACCTGAGATCAGTTTTGTAGTTTCTCTTAATAATGGCAGATGTTAGTGAGAATGTGGAGGCCTGATCCCAGATCAGAATTACAGGGAATTACAATCAAGGAGGGAGCAAAGGCTTTGAAAACCGCCAACTGTGTCTTTCATTTCCTCCGCTGTCCTTCTATGGGAAAGAAAAGCCAAACTGTAATGCTTTACATTTTCCATAACTCTCAGACCACTCTATATGCTGCAGTTGGCCGCTGCCGCTTCTTTCGAGCATATTTTACGATTAAAGTTATGATTAAAGTTACCACAAATCTACCTTTTATCTTTTAGTAGAAGAAACATGTATGTGTGCCAACAGTAGTTATACCATTAAAACATTTTTTGGTGAGAAAAGTCTAGATCAAAATATTGAATCTAATGCAAAAGCAGACAGAAGAGTACAATTTTACTAGTACAGAAAAATATTCTCCCTAAAAATTTTGAGTCAGTCATATTTTTATTTATTTATTTATTTATTAAATTAAAGGGTTAGTTCACCCAAAAATGAAATTTCTGTCATTAATTGCTCACCCTCATGTCATTCCAAACCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU471870 True 1738 lncRNA 0.37 2 4529032 4560250

Neighbor

gene id symbol gene type direction distance location
CI01000300_04465330_04479739 PI4K2B coding upstream 47794 4465098 ~ 4481238 (+)
CI01000300_04443587_04462530 HGSNAT coding upstream 66313 4443587 ~ 4462719 (+)
CI01000300_04439356_04442462 NA coding upstream 86342 4439218 ~ 4442690 (+)
CI01000300_04391216_04429569 PCDH7A coding upstream 98878 4390758 ~ 4430154 (+)
CI01000300_04211928_04219961 NA coding upstream 308889 4211169 ~ 4220143 (+)
CI01000300_05022837_05027540 NA coding downstream 462587 5022837 ~ 5028915 (+)
CI01000300_05031151_05064873 TUSC3 coding downstream 470698 5030948 ~ 5065564 (+)
CI01000300_05176333_05206119 MICU3 coding downstream 616083 5176333 ~ 5207604 (+)
CI01000300_05217150_05224947 VPS37A coding downstream 655838 5216088 ~ 5225301 (+)
CI01000300_05259191_05302329 MTUS1 coding downstream 698356 5258606 ~ 5303111 (+)
G410710 NA non-coding upstream 121064 4404801 ~ 4407968 (+)
G410659 NA non-coding upstream 221219 4307570 ~ 4307813 (+)
G410649 NA non-coding upstream 258312 4270315 ~ 4270720 (+)
G410375 NA non-coding upstream 399677 4127176 ~ 4129355 (+)
G410368 NA non-coding upstream 443850 4083018 ~ 4085182 (+)
G410776 NA non-coding downstream 96520 4656770 ~ 4658791 (+)
G410778 NA non-coding downstream 117298 4677548 ~ 4679504 (+)
G410820 NA non-coding downstream 239034 4799284 ~ 4799529 (+)
G410965 NA non-coding downstream 499645 5059895 ~ 5071843 (+)
G410980 NA non-coding downstream 535625 5095875 ~ 5096331 (+)
G410388 NA other upstream 332477 4195646 ~ 4196555 (+)
G410382 NA other upstream 404616 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 626881 3901148 ~ 3902892 (+)
G409984 NA other upstream 1256634 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 2215138 2312515 ~ 2321088 (+)
CI01000300_05891147_05892754 HELT other downstream 1330817 5891021 ~ 5892824 (+)
G411777 NA other downstream 1908995 6469245 ~ 6469705 (+)
G413459 NA other downstream 4384233 8857687 ~ 8948603 (+)
G414249 NA other downstream 5809661 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 6039686 10604458 ~ 10605033 (+)

Expression


Co-expression Network