G411174


Basic Information

Item Value
gene id G411174
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 5199039 ~ 5199252 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU472352
ATAATTCAACGGCACAGCGTCAGTTATTCCGCTTATGCGCTATGGTTACCAAGCCTCAAGACATTGTCTTGACATTGCGTCAGTGTGGGAGAGAGAGGTTGTTTTTTGGTGTGGGGCCATGGTGGGCCAAGCTGCTGATTGGGTGGGGCAGGCCCACCCTGGCCCCCTTGTGGAGCCAGGCCTGCTGGCACATAGCATTGAGTTTTGCATGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU472352 True 214 lncRNA 0.55 1 5199039 5199252

Neighbor

gene id symbol gene type direction distance location
CI01000300_05031151_05064873 TUSC3 coding upstream 133475 5030948 ~ 5065564 (+)
CI01000300_05022837_05027540 NA coding upstream 170124 5022837 ~ 5028915 (+)
CI01000300_04465330_04479739 PI4K2B coding upstream 717801 4465098 ~ 4481238 (+)
CI01000300_04443587_04462530 HGSNAT coding upstream 736320 4443587 ~ 4462719 (+)
CI01000300_04439356_04442462 NA coding upstream 756349 4439218 ~ 4442690 (+)
CI01000300_05217150_05224947 VPS37A coding downstream 16836 5216088 ~ 5225301 (+)
CI01000300_05259191_05302329 MTUS1 coding downstream 59354 5258606 ~ 5303111 (+)
CI01000300_05306807_05337120 PCM1 coding downstream 107555 5306807 ~ 5337206 (+)
CI01000300_05747200_05752154 FAT1, FAT1A coding downstream 547545 5746797 ~ 5752159 (+)
CI01000300_05768567_05786736 FAT1, FAT1A coding downstream 569145 5768397 ~ 5786830 (+)
G411169 NA non-coding upstream 24931 5173190 ~ 5174108 (+)
G411168 NA non-coding upstream 26601 5171435 ~ 5172438 (+)
G411162 NA non-coding upstream 45458 5153269 ~ 5153581 (+)
G411144 NA non-coding upstream 58820 5140003 ~ 5140219 (+)
G410980 NA non-coding upstream 102708 5095875 ~ 5096331 (+)
G411152 NA non-coding downstream 2283 5201535 ~ 5201980 (+)
G411146 NA non-coding downstream 9581 5208833 ~ 5213005 (+)
G411279 NA non-coding downstream 228807 5428059 ~ 5428306 (+)
G411301 NA non-coding downstream 258699 5457951 ~ 5458151 (+)
G410388 NA other upstream 1002484 4195646 ~ 4196555 (+)
G410382 NA other upstream 1074623 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 1296888 3901148 ~ 3902892 (+)
G409984 NA other upstream 1926641 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 2885145 2312515 ~ 2321088 (+)
CI01000300_05891147_05892754 HELT other downstream 691815 5891021 ~ 5892824 (+)
G411777 NA other downstream 1269993 6469245 ~ 6469705 (+)
G413459 NA other downstream 3745231 8857687 ~ 8948603 (+)
G414249 NA other downstream 5170659 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 5400684 10604458 ~ 10605033 (+)

Expression


Co-expression Network