Gene
RNA
| Item | Value |
|---|---|
| gene id | G411152 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000300 |
| NCBI id | null |
| chromosome length | 11740502 |
| location | 5201535 ~ 5201980 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU472330 | True | 446 | lncRNA | 0.40 | 1 | 5201535 | 5201980 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000300_05031151_05064873 | TUSC3 | coding | upstream | 135971 | 5030948 ~ 5065564 (+) |
| CI01000300_05022837_05027540 | NA | coding | upstream | 172620 | 5022837 ~ 5028915 (+) |
| CI01000300_04465330_04479739 | PI4K2B | coding | upstream | 720297 | 4465098 ~ 4481238 (+) |
| CI01000300_04443587_04462530 | HGSNAT | coding | upstream | 738816 | 4443587 ~ 4462719 (+) |
| CI01000300_04439356_04442462 | NA | coding | upstream | 758845 | 4439218 ~ 4442690 (+) |
| CI01000300_05217150_05224947 | VPS37A | coding | downstream | 14108 | 5216088 ~ 5225301 (+) |
| CI01000300_05259191_05302329 | MTUS1 | coding | downstream | 56626 | 5258606 ~ 5303111 (+) |
| CI01000300_05306807_05337120 | PCM1 | coding | downstream | 104827 | 5306807 ~ 5337206 (+) |
| CI01000300_05747200_05752154 | FAT1, FAT1A | coding | downstream | 544817 | 5746797 ~ 5752159 (+) |
| CI01000300_05768567_05786736 | FAT1, FAT1A | coding | downstream | 566417 | 5768397 ~ 5786830 (+) |
| G411174 | NA | non-coding | upstream | 2283 | 5199039 ~ 5199252 (+) |
| G411169 | NA | non-coding | upstream | 27427 | 5173190 ~ 5174108 (+) |
| G411168 | NA | non-coding | upstream | 29097 | 5171435 ~ 5172438 (+) |
| G411162 | NA | non-coding | upstream | 47954 | 5153269 ~ 5153581 (+) |
| G411144 | NA | non-coding | upstream | 61316 | 5140003 ~ 5140219 (+) |
| G411146 | NA | non-coding | downstream | 6853 | 5208833 ~ 5213005 (+) |
| G411279 | NA | non-coding | downstream | 226079 | 5428059 ~ 5428306 (+) |
| G411301 | NA | non-coding | downstream | 255971 | 5457951 ~ 5458151 (+) |
| G411305 | NA | non-coding | downstream | 266499 | 5468479 ~ 5468829 (+) |
| G410388 | NA | other | upstream | 1004980 | 4195646 ~ 4196555 (+) |
| G410382 | NA | other | upstream | 1077119 | 4123698 ~ 4124416 (+) |
| CI01000300_03901275_03902800 | NA | other | upstream | 1299384 | 3901148 ~ 3902892 (+) |
| G409984 | NA | other | upstream | 1929137 | 3271685 ~ 3272398 (+) |
| CI01000300_02313596_02320912 | NA | other | upstream | 2887641 | 2312515 ~ 2321088 (+) |
| CI01000300_05891147_05892754 | HELT | other | downstream | 689087 | 5891021 ~ 5892824 (+) |
| G411777 | NA | other | downstream | 1267265 | 6469245 ~ 6469705 (+) |
| G413459 | NA | other | downstream | 3742503 | 8857687 ~ 8948603 (+) |
| G414249 | NA | other | downstream | 5167931 | 10369911 ~ 10373898 (+) |
| CI01000300_10604458_10604787 | NA | other | downstream | 5397956 | 10604458 ~ 10605033 (+) |
