Gene
RNA
| Item | Value |
|---|---|
| gene id | G411421 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000300 |
| NCBI id | null |
| chromosome length | 11740502 |
| location | 5677220 ~ 5677467 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU472618 | True | 248 | lncRNA | 0.50 | 1 | 5677220 | 5677467 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000300_05306807_05337120 | PCM1 | coding | upstream | 340014 | 5306807 ~ 5337206 (+) |
| CI01000300_05259191_05302329 | MTUS1 | coding | upstream | 374521 | 5258606 ~ 5303111 (+) |
| CI01000300_05217150_05224947 | VPS37A | coding | upstream | 451919 | 5216088 ~ 5225301 (+) |
| CI01000300_05176333_05206119 | MICU3 | coding | upstream | 469616 | 5176333 ~ 5207604 (+) |
| CI01000300_05031151_05064873 | TUSC3 | coding | upstream | 611656 | 5030948 ~ 5065564 (+) |
| CI01000300_05747200_05752154 | FAT1, FAT1A | coding | downstream | 69330 | 5746797 ~ 5752159 (+) |
| CI01000300_05768567_05786736 | FAT1, FAT1A | coding | downstream | 90930 | 5768397 ~ 5786830 (+) |
| CI01000300_05791658_05831583 | FAT1, FAT1A | coding | downstream | 113549 | 5791016 ~ 5832224 (+) |
| CI01000300_05841871_05849693 | CASP3, CASP3A | coding | downstream | 164143 | 5841610 ~ 5850618 (+) |
| CI01000300_05891147_05892754 | HELT | coding | downstream | 213554 | 5891021 ~ 5892824 (+) |
| G411361 | NA | non-coding | upstream | 121310 | 5550978 ~ 5555910 (+) |
| G411305 | NA | non-coding | upstream | 208391 | 5468479 ~ 5468829 (+) |
| G411301 | NA | non-coding | upstream | 219069 | 5457951 ~ 5458151 (+) |
| G411279 | NA | non-coding | upstream | 248914 | 5428059 ~ 5428306 (+) |
| G411422 | NA | non-coding | downstream | 3286 | 5680753 ~ 5680984 (+) |
| G411451 | NA | non-coding | downstream | 26182 | 5703649 ~ 5703916 (+) |
| G411437 | NA | non-coding | downstream | 30964 | 5708431 ~ 5708906 (+) |
| G411464 | NA | non-coding | downstream | 157390 | 5834857 ~ 5835068 (+) |
| G411470 | NA | non-coding | downstream | 160614 | 5838081 ~ 5838305 (+) |
| G410388 | NA | other | upstream | 1480665 | 4195646 ~ 4196555 (+) |
| G410382 | NA | other | upstream | 1552804 | 4123698 ~ 4124416 (+) |
| CI01000300_03901275_03902800 | NA | other | upstream | 1775069 | 3901148 ~ 3902892 (+) |
| G409984 | NA | other | upstream | 2404822 | 3271685 ~ 3272398 (+) |
| CI01000300_02313596_02320912 | NA | other | upstream | 3363326 | 2312515 ~ 2321088 (+) |
| G411777 | NA | other | downstream | 791778 | 6469245 ~ 6469705 (+) |
| G413459 | NA | other | downstream | 3267016 | 8857687 ~ 8948603 (+) |
| G414249 | NA | other | downstream | 4692444 | 10369911 ~ 10373898 (+) |
| CI01000300_10604458_10604787 | NA | other | downstream | 4922469 | 10604458 ~ 10605033 (+) |
