G411511


Basic Information

Item Value
gene id G411511
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 5933522 ~ 5933922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU472710
CAAGAAGATACTCAAGTTCCACTGACCACTAGACAATTCATTCCTCTGATGAGATAGCGCCCTCGTGTGGTTGAACACGTGACAGTCTGAATATTTATTAAATTTACGAATTATGGTGGTTAAGAAGCAAGAACTGGTAAACCTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAGATTTTCATGACTAAAAGTTCCGTTAAATGTTTCTCGAAATGTTTTATTTTGTTGTATAGGCTATGTTGTGTTGAAAGATAGATAGATGTTTCACAGTCAGCAAATTATGTGTCCTCTAACTCTGTTTCATGTGCTGAAATGTTGATTTATCCGACAGCCAGACCACCATAAATTCACAAAGCATTACTATTCCATTATCAGCAGCTGTAGGTGGTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU472710 True 401 lncRNA 0.34 1 5933522 5933922

Neighbor

gene id symbol gene type direction distance location
CI01000300_05891147_05892754 HELT coding upstream 40698 5891021 ~ 5892824 (+)
CI01000300_05841871_05849693 CASP3, CASP3A coding upstream 82904 5841610 ~ 5850618 (+)
CI01000300_05791658_05831583 FAT1, FAT1A coding upstream 101298 5791016 ~ 5832224 (+)
CI01000300_05768567_05786736 FAT1, FAT1A coding upstream 146692 5768397 ~ 5786830 (+)
CI01000300_05747200_05752154 FAT1, FAT1A coding upstream 181363 5746797 ~ 5752159 (+)
CI01000300_05936720_05938628 SLC25A4, SLC25A5, SLC25A4.L coding downstream 2074 5935996 ~ 5939057 (+)
CI01000300_05952579_05954888 ANKRD37 coding downstream 18657 5952579 ~ 5954892 (+)
CI01000300_06064983_06069084 TLR3 coding downstream 130831 6064753 ~ 6069593 (+)
CI01000300_06074165_06081192 CYP4V8 coding downstream 138076 6071998 ~ 6081934 (+)
CI01000300_06421690_06424597 NA coding downstream 487768 6421690 ~ 6424603 (+)
G411505 NA non-coding upstream 28069 5905243 ~ 5905453 (+)
G411503 NA non-coding upstream 31126 5902036 ~ 5902396 (+)
G411474 NA non-coding upstream 67877 5864875 ~ 5865645 (+)
G411470 NA non-coding upstream 95217 5838081 ~ 5838305 (+)
G411464 NA non-coding upstream 98454 5834857 ~ 5835068 (+)
G411512 NA non-coding downstream 11 5933933 ~ 5934718 (+)
G411513 NA non-coding downstream 972 5934894 ~ 5935121 (+)
G411517 NA non-coding downstream 36801 5970723 ~ 5976635 (+)
G411536 NA non-coding downstream 100725 6034647 ~ 6107534 (+)
G411570 NA non-coding downstream 221436 6155358 ~ 6155837 (+)
G410388 NA other upstream 1736967 4195646 ~ 4196555 (+)
G410382 NA other upstream 1809106 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 2031371 3901148 ~ 3902892 (+)
G409984 NA other upstream 2661124 3271685 ~ 3272398 (+)
G411777 NA other downstream 535323 6469245 ~ 6469705 (+)
G413459 NA other downstream 3010561 8857687 ~ 8948603 (+)
G414249 NA other downstream 4435989 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 4666014 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 4712269 10661680 ~ 10674265 (+)

Expression


Co-expression Network