G412201


Basic Information

Item Value
gene id G412201
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 7994928 ~ 7997335 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU473475
ACTGCTTTTGGTTACTTTTCTGATTTATAGAATAATTTTTAGGATAAAGATTTTGAGAAATTCTTGTAAATAAAATGAAACATTAGATTAATTTTATTAATTTATTAAGTCAGATATATTAAAGTAATACACTTAAGTTACAATATAGTATACAGAAGTGTCCTTTTTCTTCTTGCTCTGATCCACAAGAGGGCAGCATTTGTCTATTCAGGAAAGGGCCAGACATGCTTTATGTTGCTGTATAAATATAAGTATGAGAACCTGAGGAGGTGGTCTTCTCCAGAGCCTTGGTTCTTTCCAAGGAAGCATAAGGGATTTTTTCCTTTCTCTATTAAGCTTAGAACAATATGTATCATGAAAGGCTATATACAAACAAATTTAATTGAACCTGAAATTAGTAGGGTGGATGAGTGTTCTACAAACAGCTTTTTATTCACCGTTCTGTGACTGCGATTGTACATATGACTACAGTTACACAGTGTGAACAAATAGTAAGCTTTTTAAATTCGAACAAATTTCGTTTTAAGGAAAAATGGTAATACTGTACAATAAGGTCCCATTAGTTAATGTAAATGAATGAACTAAAATTAACCAGCAATAAGCAAAGATGCAAACTCCTTAAATATCCTGGATAGCGGGGGCACATCTTTTATAACATGAGATTTTAACCAAATGTTGGTTTAAGTAAAATAGTATGTTAATTTTTTTTCATGAAAAAATTAGTTTTGGACATATAGGGCAAATTTGTTACAGTATTTATTAATCTTTTTTCTTTGATTTGATTTGATTATAAGAATAACAGATATTCAACATTTAATTTTTTGTAAATGTTGAAATTAACATTAAGATTAAGAAATGCTTTAGAATATTATTATTTAGCGTATTATTTTTCATTGTTAGTTAATGTTAAGTAATATAGTCAACTAGTGATAACAAATGGAACATTTTTGAAGTATTACCAGAAACAATTTGTCTGATGCGATTTTTGATCTTAAAAGTTTTTTTTTCAGTTTTCATGAAAGATATGAGTCATATTTGTCAAGCATGCTTTTTTATTGCACGAATGAATACTATGAATATTACAAGAATGACTATTATTATATCAATATTGTCACTGGAAATTTGTTACCTATTTTGAAATATGGCACTTGGATGTTTTCCCATAAATACCATATTGTTTTTAATGAGTTAATAACAATAATAACTTTTATAACTTTTAATTTATAATGGACTTTATTATCTAACAAGGAAACAGGGGTTCATTCTATTCCCATTTCCACAGTATGAACACCACTGTGAATATACAGCATTTTCATAGCATTTTATGTTCTTGTTTGTCCCTTCAGTTTTTTACCCCTTATAGCAAATAGAGTGTCTCACTGAAGGAACACATGTCTTTCCTTTATTTTACAATTCACTTTCATCATCAGTGAAAGTTCTCATCATCATTGTGAGAGGGACATTCTAAAGCATGTGTGCATTTCTGGCTAGTCTGTTCTGTTCGTACTGAAGTAACCTCTTAAAGGGGTCATATCAGGACAAATCACATTATCAAAAAATCCAAAACCTCCCCAGTCCAAAAAGATAATCTGTCAAAATTAAGCAAACAACATAAGCACTGTTTCATTTCACATACAAAAGAGGCTGTTTACATAGAAGTCTTAAATGTAAAGTAGTTAAAAACAGGCCTTTAAAGTCTGCATGAAGTGAAAATTCACCAAGTCTTATAATGCATGTTATAAATGTTTTGACCTCAATGTTTAATCAAAGTCTCAAAACTCGATCTTCTGGTGAACACAGTAGACTCTAATTATTTAGTCTGCTTAAACCCCACCTAAGAATGTATTATGTAAAGAGTTCATACAGAATCTTTAGAAGCTATTAGTCATAAATTAACATTGAAATATGAAGATTGATTTAAAATCTGTCAATGTTCATTTTTAGACATTACTGAACATGATGAAGAGGCTCAGCTGTTTTTATTTGCAATAAATATTCAGTTGCTCATGGAGCATTCTCATTTTGTGTTTTAAAGAAGGGCAGTGAATGTATACTTTAAGTCTTTTTAAGTAAAAGACAGAGGTGATGAACAGTGATGTCATCTCAGGGTCAGATCCAGCTGAAAACAGGTGGGCAATGGTGTCATGATGAGACAAGGACATCATAATTCAAAGAAAGGAGAGCGGTGATGTCACATCCCAAGAAGACGACGGGATCACCTGATTCTATGCAGTGTGTCTCTCTGAATGACCCGAGAGCATGATGCACAACATGTGGTGCGATAGTATGAGTACACACACAAACGAGCCTGGACCACCACCACACAGTTATAGTACATATCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473475 True 2343 lncRNA 0.32 3 7994928 7997335

Neighbor

gene id symbol gene type direction distance location
CI01000300_07989533_07994134 PRIMPOL coding upstream 492 7989533 ~ 7994436 (+)
CI01000300_07843046_07844594 MED28 coding upstream 149939 7842381 ~ 7844989 (+)
CI01000300_07786299_07792403 NA coding upstream 202343 7786057 ~ 7792585 (+)
CI01000300_07272403_07311667 PRSS12 coding upstream 682963 7272403 ~ 7311965 (+)
CI01000300_07212456_07243544 APBB2B, APBB2 coding upstream 751248 7212456 ~ 7243680 (+)
CI01000300_08091709_08137762 PAX5 coding downstream 94248 8091583 ~ 8138748 (+)
CI01000300_08229980_08248846 KDM4C coding downstream 232645 8229980 ~ 8248846 (+)
CI01000300_08252260_08318173 DNAH6 coding downstream 254925 8252260 ~ 8318614 (+)
CI01000300_08319762_08322122 DNAH6 coding downstream 322427 8319762 ~ 8322294 (+)
CI01000300_08567722_08574695 ANXA5B coding downstream 570387 8567722 ~ 8575613 (+)
G412225 NA non-coding upstream 24026 7968901 ~ 7970902 (+)
G412209 NA non-coding upstream 47465 7946844 ~ 7947463 (+)
G412189 NA non-coding upstream 82554 7911611 ~ 7912374 (+)
G412149 NA non-coding upstream 87384 7854938 ~ 7907544 (+)
G412167 NA non-coding upstream 174830 7819774 ~ 7820098 (+)
G412214 NA non-coding downstream 7374 8004709 ~ 8008545 (+)
G412229 NA non-coding downstream 19636 8016971 ~ 8017214 (+)
G412230 NA non-coding downstream 23420 8020755 ~ 8021135 (+)
G412231 NA non-coding downstream 24968 8022303 ~ 8022526 (+)
G412234 NA non-coding downstream 26040 8023375 ~ 8023624 (+)
G411777 NA other upstream 1525223 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 2102503 5891021 ~ 5892824 (+)
G410388 NA other upstream 3798373 4195646 ~ 4196555 (+)
G410382 NA other upstream 3870512 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 4092777 3901148 ~ 3902892 (+)
G413459 NA other downstream 947148 8857687 ~ 8948603 (+)
G414249 NA other downstream 2372576 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 2602601 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 2648856 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 3706149 11704476 ~ 11708351 (+)

Expression


Co-expression Network