Gene
RNA
| Item | Value |
|---|---|
| gene id | G412214 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000300 |
| NCBI id | null |
| chromosome length | 11740502 |
| location | 8004709 ~ 8008545 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU473491 | False | 241 | lncRNA | 0.55 | 2 | 8004709 | 8008545 |
| TU473492 | True | 1744 | lncRNA | 0.34 | 2 | 8006578 | 8008545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000300_07989533_07994134 | PRIMPOL | coding | upstream | 10273 | 7989533 ~ 7994436 (+) |
| CI01000300_07843046_07844594 | MED28 | coding | upstream | 159720 | 7842381 ~ 7844989 (+) |
| CI01000300_07786299_07792403 | NA | coding | upstream | 212124 | 7786057 ~ 7792585 (+) |
| CI01000300_07272403_07311667 | PRSS12 | coding | upstream | 692744 | 7272403 ~ 7311965 (+) |
| CI01000300_07212456_07243544 | APBB2B, APBB2 | coding | upstream | 761029 | 7212456 ~ 7243680 (+) |
| CI01000300_08091709_08137762 | PAX5 | coding | downstream | 83038 | 8091583 ~ 8138748 (+) |
| CI01000300_08229980_08248846 | KDM4C | coding | downstream | 221435 | 8229980 ~ 8248846 (+) |
| CI01000300_08252260_08318173 | DNAH6 | coding | downstream | 243715 | 8252260 ~ 8318614 (+) |
| CI01000300_08319762_08322122 | DNAH6 | coding | downstream | 311217 | 8319762 ~ 8322294 (+) |
| CI01000300_08567722_08574695 | ANXA5B | coding | downstream | 559177 | 8567722 ~ 8575613 (+) |
| G412201 | NA | non-coding | upstream | 7374 | 7994928 ~ 7997335 (+) |
| G412225 | NA | non-coding | upstream | 33807 | 7968901 ~ 7970902 (+) |
| G412209 | NA | non-coding | upstream | 57246 | 7946844 ~ 7947463 (+) |
| G412189 | NA | non-coding | upstream | 92335 | 7911611 ~ 7912374 (+) |
| G412149 | NA | non-coding | upstream | 97165 | 7854938 ~ 7907544 (+) |
| G412229 | NA | non-coding | downstream | 8426 | 8016971 ~ 8017214 (+) |
| G412230 | NA | non-coding | downstream | 12210 | 8020755 ~ 8021135 (+) |
| G412231 | NA | non-coding | downstream | 13758 | 8022303 ~ 8022526 (+) |
| G412234 | NA | non-coding | downstream | 14830 | 8023375 ~ 8023624 (+) |
| G412211 | NA | non-coding | downstream | 131988 | 8140533 ~ 8140866 (+) |
| G411777 | NA | other | upstream | 1535004 | 6469245 ~ 6469705 (+) |
| CI01000300_05891147_05892754 | HELT | other | upstream | 2112284 | 5891021 ~ 5892824 (+) |
| G410388 | NA | other | upstream | 3808154 | 4195646 ~ 4196555 (+) |
| G410382 | NA | other | upstream | 3880293 | 4123698 ~ 4124416 (+) |
| CI01000300_03901275_03902800 | NA | other | upstream | 4102558 | 3901148 ~ 3902892 (+) |
| G413459 | NA | other | downstream | 935938 | 8857687 ~ 8948603 (+) |
| G414249 | NA | other | downstream | 2361366 | 10369911 ~ 10373898 (+) |
| CI01000300_10604458_10604787 | NA | other | downstream | 2591391 | 10604458 ~ 10605033 (+) |
| CI01000300_10661680_10669987 | MXD4.L, MXD4 | other | downstream | 2637646 | 10661680 ~ 10674265 (+) |
| CI01000300_11704476_11708232 | NA | other | downstream | 3694939 | 11704476 ~ 11708351 (+) |
