G412231


Basic Information

Item Value
gene id G412231
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 8022303 ~ 8022526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU473518
AAAAGCCTGATTAATCATTTCTAAGGAATTAGTCAGAGTAAATCAGTGTGAGTGATCTTGTGTGACTAACAACCAAATTCAGTTTCAACAGTGACAATAGTGAAGAAACTATATTTCTTCACTCACATCGTACTGTATCTCTCTTACTCATCTCAGCCAAGCCCTGGGGGACCCTTGAGTTTACATACTGTCTGCAAATCTTTAGAAAAAAAATGGGATTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU473518 True 224 lncRNA 0.37 1 8022303 8022526

Neighbor

gene id symbol gene type direction distance location
CI01000300_07989533_07994134 PRIMPOL coding upstream 27867 7989533 ~ 7994436 (+)
CI01000300_07843046_07844594 MED28 coding upstream 177314 7842381 ~ 7844989 (+)
CI01000300_07786299_07792403 NA coding upstream 229718 7786057 ~ 7792585 (+)
CI01000300_07272403_07311667 PRSS12 coding upstream 710338 7272403 ~ 7311965 (+)
CI01000300_07212456_07243544 APBB2B, APBB2 coding upstream 778623 7212456 ~ 7243680 (+)
CI01000300_08091709_08137762 PAX5 coding downstream 69057 8091583 ~ 8138748 (+)
CI01000300_08229980_08248846 KDM4C coding downstream 207454 8229980 ~ 8248846 (+)
CI01000300_08252260_08318173 DNAH6 coding downstream 229734 8252260 ~ 8318614 (+)
CI01000300_08319762_08322122 DNAH6 coding downstream 297236 8319762 ~ 8322294 (+)
CI01000300_08567722_08574695 ANXA5B coding downstream 545196 8567722 ~ 8575613 (+)
G412230 NA non-coding upstream 1168 8020755 ~ 8021135 (+)
G412229 NA non-coding upstream 5089 8016971 ~ 8017214 (+)
G412214 NA non-coding upstream 13758 8004709 ~ 8008545 (+)
G412201 NA non-coding upstream 24968 7994928 ~ 7997335 (+)
G412225 NA non-coding upstream 51401 7968901 ~ 7970902 (+)
G412234 NA non-coding downstream 849 8023375 ~ 8023624 (+)
G412211 NA non-coding downstream 118007 8140533 ~ 8140866 (+)
G412283 NA non-coding downstream 130406 8152932 ~ 8153175 (+)
G412284 NA non-coding downstream 140830 8163356 ~ 8170744 (+)
G412186 NA non-coding downstream 197798 8220324 ~ 8233392 (+)
G411777 NA other upstream 1552598 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 2129878 5891021 ~ 5892824 (+)
G410388 NA other upstream 3825748 4195646 ~ 4196555 (+)
G410382 NA other upstream 3897887 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 4120152 3901148 ~ 3902892 (+)
G413459 NA other downstream 921957 8857687 ~ 8948603 (+)
G414249 NA other downstream 2347385 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 2577410 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 2623665 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 3680958 11704476 ~ 11708351 (+)

Expression


Co-expression Network