G413405


Basic Information

Item Value
gene id G413405
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 8738646 ~ 8738880 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU474825
TGTAGATCCACACTAGAACTTTTTGAGACTTTCTGAAGCATCTTGCATTTTGTTTTGGGGCTGAGTGTTCAGCATTATGGATATTTTATAGTGTTGCCACCAGTGTTGGGTGTAACGCGTTACTGTAATTAAATTACTTATCCACTGAAAAAGTAAAGTAAGGGATTACTGTTCATTTTTAGGTAACTGAATTACAGTTACTTATAATGTACTGTTTTGCGTTACATACTGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU474825 True 235 lncRNA 0.34 1 8738646 8738880

Neighbor

gene id symbol gene type direction distance location
CI01000300_08713685_08718935 GTF2E2 coding upstream 18910 8713685 ~ 8719736 (+)
CI01000300_08599231_08604382 ZMYND10 coding upstream 133719 8599231 ~ 8604927 (+)
CI01000300_08567722_08574695 ANXA5B coding upstream 163057 8567722 ~ 8575613 (+)
CI01000300_08319762_08322122 DNAH6 coding upstream 416352 8319762 ~ 8322294 (+)
CI01000300_08252260_08318173 DNAH6 coding upstream 420032 8252260 ~ 8318614 (+)
CI01000300_08874463_08915149 NA coding downstream 135583 8874463 ~ 8915221 (+)
CI01000300_08917691_08926730 NA coding downstream 178811 8917691 ~ 8927877 (+)
CI01000300_08949418_08957810 LIAS coding downstream 210441 8949321 ~ 8957857 (+)
CI01000300_08979290_08987162 UBE2KB, UBE2K, UBE2KA, UBE2K.S coding downstream 239353 8978233 ~ 8988778 (+)
CI01000300_09025773_09045147 RHOH, N4BP2 coding downstream 285569 9024449 ~ 9045662 (+)
G413376 NA non-coding upstream 31294 8659048 ~ 8707352 (+)
G413385 NA non-coding upstream 64431 8673819 ~ 8674215 (+)
G413347 NA non-coding upstream 177811 8558594 ~ 8560835 (+)
G413304 NA non-coding upstream 287836 8450499 ~ 8450810 (+)
G413408 NA non-coding downstream 1721 8740601 ~ 8740904 (+)
G413409 NA non-coding downstream 2026 8740906 ~ 8741320 (+)
G413437 NA non-coding downstream 45060 8783940 ~ 8785325 (+)
G413459 NA non-coding downstream 118807 8857687 ~ 8948603 (+)
G413523 NA non-coding downstream 238535 8977415 ~ 8977692 (+)
G411777 NA other upstream 2268941 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 2846221 5891021 ~ 5892824 (+)
G410388 NA other upstream 4542091 4195646 ~ 4196555 (+)
G410382 NA other upstream 4614230 4123698 ~ 4124416 (+)
CI01000300_03901275_03902800 NA other upstream 4836495 3901148 ~ 3902892 (+)
G414249 NA other downstream 1631031 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 1861056 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 1907311 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 2964604 11704476 ~ 11708351 (+)

Expression


Co-expression Network