G414128


Basic Information

Item Value
gene id G414128
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 9815935 ~ 9816158 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU475624
GAAGACTTGGTGCTGTCATTAAAAATCATGGAGGCCATACAAAGTACTAGATGTAGTAGTTTTTGTTGTGGGGTGTACTTATTTTTGCATCACCCTAATTTGAGTAAAACTGAAAAATGTGTAATCTAAGTTACATTATTAACCTTACTTTCATGTTATAAGTTAAACAGATGTTATATTAAACTTAGTCTTGTCAACATTTTGGAAATTGTTTTTGTGTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU475624 True 224 lncRNA 0.30 1 9815935 9816158

Neighbor

gene id symbol gene type direction distance location
CI01000300_09765979_09766870 DCTPP1 coding upstream 48781 9765979 ~ 9767154 (+)
CI01000300_09725667_09740001 FAM160A1, FAM160A1A coding upstream 73898 9724270 ~ 9742037 (+)
CI01000300_09658054_09661559 RS3A, RPS3A.S, RPS3A, RPS3A1, RPS3A.L coding upstream 154224 9658054 ~ 9661711 (+)
CI01000300_09541949_09542458 NA coding upstream 273186 9541490 ~ 9542749 (+)
CI01000300_09486849_09487928 MAB21L2.S, MB211, MAB21L1, MAB21L2, MAB21L1.L, MAB21L2.L coding upstream 327911 9485781 ~ 9488024 (+)
CI01000300_09893990_09906715 NA coding downstream 74930 9891088 ~ 9906738 (+)
CI01000300_10056666_10057133 NA coding downstream 240412 10056570 ~ 10057457 (+)
CI01000300_10094312_10098589 NA coding downstream 277774 10093932 ~ 10098669 (+)
CI01000300_10167118_10172235 NA coding downstream 350960 10167118 ~ 10172235 (+)
CI01000300_10357507_10366851 PLRG1 coding downstream 541349 10357507 ~ 10367008 (+)
G414127 NA non-coding upstream 4074 9811623 ~ 9811861 (+)
G414073 NA non-coding upstream 42096 9773162 ~ 9773839 (+)
G414114 NA non-coding upstream 43587 9772008 ~ 9772348 (+)
G414089 NA non-coding upstream 123504 9691675 ~ 9692431 (+)
G413904 NA non-coding upstream 421028 9394650 ~ 9394907 (+)
G414133 NA non-coding downstream 20105 9836263 ~ 9836485 (+)
G414144 NA non-coding downstream 39252 9855410 ~ 9855703 (+)
G414146 NA non-coding downstream 49034 9865192 ~ 9865407 (+)
G414155 NA non-coding downstream 80475 9896633 ~ 9896917 (+)
G413459 NA other upstream 867332 8857687 ~ 8948603 (+)
G411777 NA other upstream 3346230 6469245 ~ 6469705 (+)
CI01000300_05891147_05892754 HELT other upstream 3923510 5891021 ~ 5892824 (+)
G410388 NA other upstream 5619380 4195646 ~ 4196555 (+)
G410382 NA other upstream 5691519 4123698 ~ 4124416 (+)
G414249 NA other downstream 553753 10369911 ~ 10373898 (+)
CI01000300_10604458_10604787 NA other downstream 783778 10604458 ~ 10605033 (+)
CI01000300_10661680_10669987 MXD4.L, MXD4 other downstream 830033 10661680 ~ 10674265 (+)
CI01000300_11704476_11708232 NA other downstream 1887326 11704476 ~ 11708351 (+)

Expression


Co-expression Network